Difference between revisions of "RbsB"

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|style="background:#ABCDEF;" align="center"|'''Function''' || ribose uptake
 
|style="background:#ABCDEF;" align="center"|'''Function''' || ribose uptake
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU35960 rbsB]
 
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/RbsB RbsB]
 
|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/RbsB RbsB]

Revision as of 16:41, 7 August 2012

Gene name rbsB
Synonyms
Essential no
Product ribose ABC transporter (binding protein)
Function ribose uptake
Gene expression levels in SubtiExpress: rbsB
Interactions involving this protein in SubtInteract: RbsB
Metabolic function and regulation of this protein in SubtiPathways:
Sugar catabolism
MW, pI 32 kDa, 6.138
Gene length, protein length 915 bp, 305 aa
Immediate neighbours rbsC, ywsB
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
RbsB context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
RbsB expression.png




























Categories containing this gene/protein

ABC transporters, utilization of specific carbon sources, membrane proteins

This gene is a member of the following regulons

AbrB regulon, CcpA regulon

The gene

Basic information

  • Locus tag: BSU35960

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: bacterial solute-binding protein 2 family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure: 2GX6 (from Escherichia coli k12 mutant, 54% identity, 71% similarity)
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • repressed by glucose (CcpA) PubMed
    • expressed upon transition into the stationary phase (AbrB) PubMed
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References