Difference between revisions of "RatA"

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* '''Description:''' regulatory RNA,  [[small RNA]], antisense for ''[[txpA]]'' <br/><br/>
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* '''Description:''' regulatory RNA,  [[ncRNA|small RNAs]], antisense for ''[[txpA]]'' <br/><br/>
  
 
{| align="right" border="1" cellpadding="2"  
 
{| align="right" border="1" cellpadding="2"  
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|style="background:#ABCDEF;" align="center"| '''Essential''' || no
 
|style="background:#ABCDEF;" align="center"| '''Essential''' || no
 
|-
 
|-
|style="background:#ABCDEF;" align="center"| '''Product''' || ''[[txpA]]'' antisense RNA
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|style="background:#ABCDEF;" align="center"| '''Product''' || ''[[txpA]]'' [[antisense RNA|small RNAs]]
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"|'''Function''' || control of ''[[txpA]]'' expression
 
|style="background:#ABCDEF;" align="center"|'''Function''' || control of ''[[txpA]]'' expression

Revision as of 08:14, 8 October 2010

Gene name ratA
Synonyms
Essential no
Product txpA small RNAs
Function control of txpA expression
Gene length 222 bp
Immediate neighbours yqbN, bsrH
Gene sequence (+200bp)
Genetic context
File:GenE context.gif



The gene

Basic information

  • Locus tag:

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry:
  • Structure:

Additional information

The RNA

binds the txpA mRNA and triggers its degradation PubMed

Expression and regulation

  • Operon:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Richard Losick, Harvard University, Cambridge, USA Homepage

Your additional remarks

References

Jessica M Silvaggi, John B Perkins, Richard Losick
Small untranslated RNA antitoxin in Bacillus subtilis.
J Bacteriol: 2005, 187(19);6641-50
[PubMed:16166525] [WorldCat.org] [DOI] (P p)