Difference between revisions of "RatA"

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* '''Description:''' regulatory RNA, ncRNA, antisense for txpA <br/><br/>
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* '''Description:''' regulatory RNA, ncRNA, antisense for ''[[txpA]]'' <br/><br/>
  
 
{| align="right" border="1" cellpadding="2"  
 
{| align="right" border="1" cellpadding="2"  
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|style="background:#ABCDEF;" align="center"| '''Essential''' || no
 
|style="background:#ABCDEF;" align="center"| '''Essential''' || no
 
|-
 
|-
|style="background:#ABCDEF;" align="center"| '''Product''' || txpA antisense RNA
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|style="background:#ABCDEF;" align="center"| '''Product''' || ''[[txpA]]'' antisense RNA
 
|-
 
|-
|style="background:#ABCDEF;" align="center"|'''Function''' || control of txpA expression
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|style="background:#ABCDEF;" align="center"|'''Function''' || control of ''[[txpA]]'' expression
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"| '''Gene length''' || 222 bp
 
|style="background:#ABCDEF;" align="center"| '''Gene length''' || 222 bp

Revision as of 10:38, 21 May 2009

  • Description: regulatory RNA, ncRNA, antisense for txpA

Gene name ratA
Synonyms
Essential no
Product txpA antisense RNA
Function control of txpA expression
Gene length 222 bp
Immediate neighbours yqbN, bsrH
Gene sequence (+200bp)
Genetic context
File:GenE context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Coordinates (CDS):

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry:
  • Structure:

Additional information

The RNA

binds the txpA mRNA and triggers its degradation PubMed

Expression and regulation

  • Operon:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Richard Losick, Harvard University, Cambridge, USA Homepage

Your additional remarks

References

  1. Silvaggi JM, Perkins JB, Losick R (2005) Small untranslated RNA antitoxin in Bacillus subtilis.J. Bacteriol. 187: 6641-6650. PubMed
  2. Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed