Difference between revisions of "RatA"

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* '''Description:''' regulatory RNA,  [[ncRNA|small RNAs]], antisense for ''[[txpA]]'' <br/><br/>
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* '''Description:''' regulatory RNA,  [[small RNAs|ncRNA]], antisense for ''[[txpA]]'' <br/><br/>
  
 
{| align="right" border="1" cellpadding="2"  
 
{| align="right" border="1" cellpadding="2"  
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|style="background:#ABCDEF;" align="center"| '''Essential''' || no
 
|style="background:#ABCDEF;" align="center"| '''Essential''' || no
 
|-
 
|-
|style="background:#ABCDEF;" align="center"| '''Product''' || ''[[txpA]]'' [[antisense RNA|small RNAs]]
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|style="background:#ABCDEF;" align="center"| '''Product''' || ''[[txpA]]'' [[small RNAs|antisense RNA]]
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"|'''Function''' || control of ''[[txpA]]'' expression
 
|style="background:#ABCDEF;" align="center"|'''Function''' || control of ''[[txpA]]'' expression

Revision as of 08:16, 8 October 2010

  • Description: regulatory RNA, ncRNA, antisense for txpA

Gene name ratA
Synonyms
Essential no
Product txpA antisense RNA
Function control of txpA expression
Gene length 222 bp
Immediate neighbours yqbN, bsrH
Gene sequence (+200bp)
Genetic context
File:GenE context.gif



The gene

Basic information

  • Locus tag:

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry:
  • Structure:

Additional information

The RNA

binds the txpA mRNA and triggers its degradation PubMed

Expression and regulation

  • Operon:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Richard Losick, Harvard University, Cambridge, USA Homepage

Your additional remarks

References

Jessica M Silvaggi, John B Perkins, Richard Losick
Small untranslated RNA antitoxin in Bacillus subtilis.
J Bacteriol: 2005, 187(19);6641-50
[PubMed:16166525] [WorldCat.org] [DOI] (P p)