Difference between revisions of "RapJ"

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* '''Description:''' [[response regulator aspartate phosphatase]]<br/><br/>
+
* '''Description:''' [[response regulator aspartate phosphatase]], dephosphorylates [[Spo0F]]-P<br/><br/>
  
 
{| align="right" border="1" cellpadding="2"  
 
{| align="right" border="1" cellpadding="2"  
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|style="background:#ABCDEF;" align="center"| '''Product''' || [[response regulator aspartate phosphatase]]
 
|style="background:#ABCDEF;" align="center"| '''Product''' || [[response regulator aspartate phosphatase]]
 
|-
 
|-
|style="background:#ABCDEF;" align="center"|'''Function''' || unknown
+
|style="background:#ABCDEF;" align="center"|'''Function''' || control of the [[phosphorelay]]
 
|-
 
|-
 
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU02820 rapJ]
 
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU02820 rapJ]
 +
|-
 +
|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/RapJ RapJ]
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 44 kDa, 4.902   
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 44 kDa, 4.902   
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<br/><br/><br/><br/>
 
<br/><br/><br/><br/>
 
<br/><br/><br/><br/>
 
<br/><br/><br/><br/>
<br/><br/><br/><br/>
 
<br/><br/><br/><br/>
 
 
 
 
<br/><br/>
 
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= [[Categories]] containing this gene/protein =
 
= [[Categories]] containing this gene/protein =
 
{{SubtiWiki category|[[protein modification]]}},
 
{{SubtiWiki category|[[protein modification]]}},
 +
{{SubtiWiki category|[[phosphorelay]]}},
 
{{SubtiWiki category|[[transcription factors and their control]]}}
 
{{SubtiWiki category|[[transcription factors and their control]]}}
  
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* '''Catalyzed reaction/ biological activity:'''  
 
* '''Catalyzed reaction/ biological activity:'''  
 +
** dephosphorylates [[Spo0F]]-P {{PubMed|21346797}}
  
 
* '''Protein family:''' RAP family (according to Swiss-Prot)
 
* '''Protein family:''' RAP family (according to Swiss-Prot)
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* '''Effectors of protein activity:'''
 
* '''Effectors of protein activity:'''
 +
** the interaction with [[PhrC]] inactivates [[RapJ]] {{PubMed|23526881}}
  
 
* '''[[SubtInteract|Interactions]]:'''
 
* '''[[SubtInteract|Interactions]]:'''
 +
** [[RapJ]]-[[Spo0F]], dephosphorylation of [[Spo0F]]-P {{PubMed|21346797}}
 +
** [[RapJ]]-[[PhrC]] {{PubMed|23526881}}
  
 
* '''[[Localization]]:'''
 
* '''[[Localization]]:'''
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=Labs working on this gene/protein=
 
=Labs working on this gene/protein=
 
[[Ciaran Condon]], IBPC, Paris, France [http://www.ibpc.fr/UPR9073/condon/index_en.html Homepage]
 
  
 
=Your additional remarks=
 
=Your additional remarks=
  
 
=References=
 
=References=
 
+
<pubmed>21346797 23526881 </pubmed>
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 17:20, 27 March 2013

Gene name rapJ
Synonyms ycdE
Essential no
Product response regulator aspartate phosphatase
Function control of the phosphorelay
Gene expression levels in SubtiExpress: rapJ
Interactions involving this protein in SubtInteract: RapJ
MW, pI 44 kDa, 4.902
Gene length, protein length 1119 bp, 373 aa
Immediate neighbours cwlK, ycdF
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
RapJ context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
RapJ expression.png















Categories containing this gene/protein

protein modification, phosphorelay, transcription factors and their control

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU02820

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: RAP family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Operon: rapJ (according to DBTBS)
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References