Difference between revisions of "RNase Y targets"

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(RNAs that are targeted by RNase Y)
(RNAs that are targeted by RNase Y)
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* ''[[yflS]]'' {{PubMed|21815947}}
 
* ''[[yflS]]'' {{PubMed|21815947}}
 
* several [[SP-beta prophage]] genes, exemplified by ''[[yorW]]'' {{PubMed|21815947}}
 
* several [[SP-beta prophage]] genes, exemplified by ''[[yorW]]'' {{PubMed|21815947}}
 +
* ''[[sinR]]'' {{PubMed|21815947}}
 +
* ''[[sinI]]-[[sinR]]'' {{PubMed|21815947}}
  
 
=== Decreased RNA amount upon [[rny|RNase Y]] depletion ===
 
=== Decreased RNA amount upon [[rny|RNase Y]] depletion ===
 +
 +
* ''[[slrR]]'' {{PubMed|21815947}} (this is likely due to the increased stability of the ''[[sinR]]'' mRNA upon [[rny|RNase Y]] depletion {{PubMed|21815947}})
 +
* ''[[epsA]]-[[epsB]]-[[epsC]]-[[epsD]]-[[epsE]]-[[epsF]]-[[epsG]]-[[epsH]]-[[epsI]]-[[epsJ]]-[[epsK]]-[[epsL]]-[[epsM]]-[[epsN]]-[[epsO]]'' {{PubMed|21815947}} (this is likely due to the increased stability of the ''[[sinR]]'' mRNA upon [[rny|RNase Y]] depletion {{PubMed|21815947}})
 +
* ''[[ctaO]]'' {{PubMed|21815947}}
 +
* ''[[lip]]'' {{PubMed|21815947}}
 +
* ''[[sunT]]-[[bdbA]]-[[yolJ]]'' {{PubMed|21815947}}
 +
* ''[[yydF]]-[[yydG]]-[[yydH]]-[[yydI]]-[[yydJ]]'' {{PubMed|21815947}}
 +
* ''[[tapA]]-[[sipW]]-[[tasA]]'' {{PubMed|21815947}} (this is likely due to the increased stability of the ''[[sinR]]'' mRNA upon [[rny|RNase Y]] depletion {{PubMed|21815947}})
 +
* ''[[dhbA]]-[[dhbC]]-[[dhbE]]-[[dhbB]]-[[dhbF]]'' {{PubMed|21815947}}
 +
* ''[[thrZ]]'' {{PubMed|21815947}}
 +
* ''[[yfmG]]'' {{PubMed|21815947}}
 +
* ''[[sdpA]]-[[sdpB]]-[[sdpC]]'' {{PubMed|21815947}}
 +
* ''[[wprA]]'' {{PubMed|21815947}}
 +
* ''[[yxeK]]-[[yxeL]]-[[yxeM]]'' {{PubMed|21815947}}
 +
* ''[[yxbB]]'' {{PubMed|21815947}}
  
 
= Important publications on [[rny|RNase Y]] targets =
 
= Important publications on [[rny|RNase Y]] targets =

Revision as of 17:58, 10 August 2011

Regulator

RNase Y

RNAs that are targeted by RNase Y

RNAs directly cleaved by RNase Y

Increased RNA amount upon RNase Y depletion

Decreased RNA amount upon RNase Y depletion

Important publications on RNase Y targets

Lehnik-Habrink M, Schaffer M, Mäder U, Diethmaier C, Herzberg C, Stülke J.  
RNA processing in Bacillus subtilis: identification of targets of the essential RNase Y. 
Mol Microbiol. 2011 Aug 4. doi: 10.1111/j.1365-2958.2011.07777.x. [Epub ahead of print] 
PubMed:21815947

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