Difference between revisions of "RNase Y targets"

From SubtiWiki
Jump to: navigation, search
(RNAs directly cleaved by RNase Y)
(RNAs directly cleaved by RNase Y)
Line 18: Line 18:
 
* processing of the ''[[menA]]'' leader mRNA {{PubMed|29794222}}
 
* processing of the ''[[menA]]'' leader mRNA {{PubMed|29794222}}
 
* processing of the ''[[metN]]-[[metP]]-[[metQ]]'' operon mRNA between ''[[metP]]'' and ''[[metQ]]'' {{PubMed|29794222}}  
 
* processing of the ''[[metN]]-[[metP]]-[[metQ]]'' operon mRNA between ''[[metP]]'' and ''[[metQ]]'' {{PubMed|29794222}}  
* processing of the ''[[moaC]]-[[rex]]-[[tatAY]]-[[tatCY]]'' operon mRNA between ''[[rex]]'' and ''[[tatAY]]'' {{PubMed|29794222}}
+
* processing of the ''[[ydiG]]-[[rex]]-[[tatAY]]-[[tatCY]]'' operon mRNA between ''[[rex]]'' and ''[[tatAY]]'' {{PubMed|29794222}}
 
* processing of the ''[[rplGB]]-[[rpsL]]-[[rpsG]]-[[fusA]]-[[tufA]]'' operon mRNA between ''[[rplGB]]'' and ''[[rpsL]]'' {{PubMed|29794222}}
 
* processing of the ''[[rplGB]]-[[rpsL]]-[[rpsG]]-[[fusA]]-[[tufA]]'' operon mRNA between ''[[rplGB]]'' and ''[[rpsL]]'' {{PubMed|29794222}}
 
* processing of the ''[[rpoB]]-[[rpoC]]'' leader mRNA {{PubMed|29794222}}
 
* processing of the ''[[rpoB]]-[[rpoC]]'' leader mRNA {{PubMed|29794222}}

Revision as of 12:01, 30 May 2018

Regulator

RNase Y

RNAs that are targeted by RNase Y

  • The targets listed below are affected >2.5 fold upon RNase Y depletion PubMed

RNAs directly cleaved by RNase Y

Increased RNA amount upon RNase Y depletion

Decreased RNA amount upon RNase Y depletion

Important publications on RNase Y targets

Soumaya Laalami, Philippe Bessières, Anna Rocca, Léna Zig, Pierre Nicolas, Harald Putzer
Bacillus subtilis RNase Y activity in vivo analysed by tiling microarrays.
PLoS One: 2013, 8(1);e54062
[PubMed:23326572] [WorldCat.org] [DOI] (I p)

Sylvain Durand, Laetitia Gilet, Philippe Bessières, Pierre Nicolas, Ciarán Condon
Three essential ribonucleases-RNase Y, J1, and III-control the abundance of a majority of Bacillus subtilis mRNAs.
PLoS Genet: 2012, 8(3);e1002520
[PubMed:22412379] [WorldCat.org] [DOI] (I p)

Martin Lehnik-Habrink, Marc Schaffer, Ulrike Mäder, Christine Diethmaier, Christina Herzberg, Jörg Stülke
RNA processing in Bacillus subtilis: identification of targets of the essential RNase Y.
Mol Microbiol: 2011, 81(6);1459-73
[PubMed:21815947] [WorldCat.org] [DOI] (I p)


Back to regulons