Difference between revisions of "QdoR"

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(Extended information on the protein)
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* '''Operon:''' ''qdoR'' {{PubMed|10746760}}
 
* '''Operon:''' ''qdoR'' {{PubMed|10746760}}
  
* '''[[Sigma factor]]:'''  
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yxaF_4107352_4107927_-1 qdoR] {{PubMed|22383849}}
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* '''Sigma factor:'''  
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  

Revision as of 10:15, 17 April 2012

Gene name qdoR
Synonyms yxaF
Essential no
Product transcriptional regulator
Function control of quercetin utilization
MW, pI 20 kDa, 6.111
Gene length, protein length 573 bp, 191 aa
Immediate neighbours qdoI, yxnA
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YxaF context.gif
This image was kindly provided by SubtiList





Categories containing this gene/protein

transcription factors and their control, resistance against other toxic compounds (nitric oxide, phenolic acids, flavonoids, oxalate)

This gene is a member of the following regulons

LmrA regulon, QdoR regulon

The QdoR regulon:

The gene

Basic information

  • Locus tag: BSU39990

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s): LmrA

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity: flavonoids such as quercetin act as molecular inducers and result in release from DNA targets PubMed

Database entries

  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References