Difference between revisions of "PyrD"

From SubtiWiki
Jump to: navigation, search
Line 35: Line 35:
 
=== Basic information ===
 
=== Basic information ===
  
* '''Locus tag:'''
+
* '''Locus tag:''' BSU15540
  
 
===Phenotypes of a mutant ===
 
===Phenotypes of a mutant ===
Line 80: Line 80:
 
* '''Swiss prot entry:''' [http://www.uniprot.org/uniprot/P25996 P25996]
 
* '''Swiss prot entry:''' [http://www.uniprot.org/uniprot/P25996 P25996]
  
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu+BSU15540 BSU15540]
+
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu+BSU15540]
  
 
* '''E.C. number:''' [http://www.expasy.org/enzyme/1.3.3.1 1.3.3.1]
 
* '''E.C. number:''' [http://www.expasy.org/enzyme/1.3.3.1 1.3.3.1]

Revision as of 09:55, 3 June 2009

  • Description: dihydoorotic acid dehydrogenase (catalytic subunit)

Gene name pyrD
Synonyms pyrDI
Essential no
Product dihydoorotic acid dehydrogenase (catalytic subunit)
Function pyrimidine biosynthesis
MW, pI 32 kDa, 4.942
Gene length, protein length 933 bp, 311 aa
Immediate neighbours pyrK, pyrF
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
PyrD context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Locus tag: BSU15540

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: (S)-dihydroorotate + O2 = orotate + H2O2 (according to Swiss-Prot)
  • Protein family: Type 1 subfamily (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization: cytoplasm (according to Swiss-Prot)

Database entries

  • Structure:
  • KEGG entry: [3]

Additional information

Expression and regulation

  • Operon:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

  1. Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed