Difference between revisions of "PrkD"

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(Biological materials)
(Biological materials)
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* '''Expression vector:''' pGP390 (N-terminal Strep-tag, purification from ''B. subtilis'', for [[SPINE]], in [[pGP380]]), available in [[Stülke]] lab
 
* '''Expression vector:''' pGP390 (N-terminal Strep-tag, purification from ''B. subtilis'', for [[SPINE]], in [[pGP380]]), available in [[Stülke]] lab
 
          
 
          
* '''lacZ fusion:'''
+
* '''lacZ fusion:''' pGP830 (in [[pAC7]]), available in [[Stülke]] lab
  
 
* '''GFP fusion:'''
 
* '''GFP fusion:'''

Revision as of 19:09, 26 October 2009

  • Description: protein kinase D

Gene name prkD
Synonyms ybdM
Essential no
Product protein kinase D
Function unknown
MW, pI 29 kDa, 6.359
Gene length, protein length 768 bp, 256 aa
Immediate neighbours ybdL, ybdN
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YbdM context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Locus tag: BSU02030

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: ATP + a protein = ADP + a phosphoprotein (according to Swiss-Prot)
  • Protein family: protein kinase domain (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant: GP578 (aphA3), available in the Stülke lab
  • Expression vector: pGP390 (N-terminal Strep-tag, purification from B. subtilis, for SPINE, in pGP380), available in Stülke lab
  • lacZ fusion: pGP830 (in pAC7), available in Stülke lab
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References