Difference between revisions of "PhrG"
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=Expression and regulation= | =Expression and regulation= | ||
| + | * '''Operon:''' ''[[rapG]]-[[phrG]]'' {{PubMed|12950930}} | ||
| − | * ''' | + | * '''[[Sigma factor]]:''' [[SigA]] {{PubMed|16553878}}, SigH {{PubMed|12950930}} |
| − | * '''[[ | + | * '''Regulation:''' |
| + | ** repressed by [[SinR]] [http://www.ncbi.nlm.nih.gov/sites/entrez/16430695 PubMed] | ||
| + | ** repressed by [[RghR]] {{PubMed|16553878}} | ||
| + | ** repressed by glucose (4.8-fold) ([[CcpA]]) [http://www.ncbi.nlm.nih.gov/pubmed/12850135 PubMed] | ||
| + | |||
| + | * '''Regulatory mechanism:''' | ||
| + | ** [[SinR]]: transcription repression [http://www.ncbi.nlm.nih.gov/sites/entrez/16430695 PubMed] | ||
| + | ** [[RghR]]: transcription repression {{PubMed|16553878}} | ||
| + | ** [[CcpA]]: transcription repression [http://www.ncbi.nlm.nih.gov/pubmed/12850135 PubMed] | ||
| − | + | * '''Additional information:''' | |
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | * '''Additional information:''' | ||
=Biological materials = | =Biological materials = | ||
Revision as of 20:26, 11 February 2010
- Description: response regulator aspartate phosphatase (RapG) regulator
| Gene name | phrG |
| Synonyms | yycL |
| Essential | no |
| Product | phosphatase (RapG) regulator |
| Function | control of DegU activity |
| MW, pI | 4 kDa, 9.017 |
| Gene length, protein length | 114 bp, 38 aa |
| Immediate neighbours | rapG, rocF |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
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Contents
The gene
Basic information
- Locus tag: BSU40310
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: binds to RapG, this results in the inability of RapG to interact with DegU PubMed
- Protein family: phr family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization:
Database entries
- Structure:
- UniProt: O32295
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Sigma factor: SigA PubMed, SigH PubMed
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
