Difference between revisions of "PhoH"
(→Database entries) |
|||
| Line 99: | Line 99: | ||
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU25340&redirect=T BSU25340] | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU25340&redirect=T BSU25340] | ||
| − | * '''Structure:''' | + | * '''Structure:''' [http://pdb.org/pdb/explore/explore.do?structureId=3B85 3B85] (aa 115-315, the protein from ''Corynebacterium glutamicum'', 65% identity, 90% similarity) |
* '''UniProt:''' [http://www.uniprot.org/uniprot/P46343 P46343] | * '''UniProt:''' [http://www.uniprot.org/uniprot/P46343 P46343] | ||
Revision as of 11:42, 25 February 2015
- Description: phosphate starvation-induced protein
| Gene name | phoH |
| Synonyms | yqfE |
| Essential | no |
| Product | unknown |
| Function | unkown |
| Gene expression levels in SubtiExpress: phoH | |
| MW, pI | 35 kDa, 6.123 |
| Gene length, protein length | 957 bp, 319 aa |
| Immediate neighbours | yqfF, yqfD |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
membrane proteins, poorly characterized/ putative enzymes
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU25340
Phenotypes of a mutant
Database entries
- BsubCyc: BSU25340
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: phoH family (according to Swiss-Prot)
- Paralogous protein(s): YlaK
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization: cell membrane (according to Swiss-Prot)
Database entries
- BsubCyc: BSU25340
- Structure: 3B85 (aa 115-315, the protein from Corynebacterium glutamicum, 65% identity, 90% similarity)
- UniProt: P46343
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Sigma factor:
- Regulation:
- Regulatory mechanism:
- Additional information:
- number of protein molecules per cell (minimal medium with glucose and ammonium): 60 PubMed
- number of protein molecules per cell (complex medium with amino acids, without glucose): 282 PubMed
- number of protein molecules per cell (minimal medium with glucose and ammonium, exponential phase): 399 PubMed
- number of protein molecules per cell (minimal medium with glucose and ammonium, early stationary phase after glucose exhaustion): 370 PubMed
- number of protein molecules per cell (minimal medium with glucose and ammonium, late stationary phase after glucose exhaustion): 464 PubMed
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Alexei E Kazakov, Olga Vassieva, Mikhail S Gelfand, Andrei Osterman, Ross Overbeek
Bioinformatics classification and functional analysis of PhoH homologs.
In Silico Biol: 2003, 3(1-2);3-15
[PubMed:12762842]
[WorldCat.org]
(P p)
