PghZ

• Description: phage-derived gamma polyglutamic acid hydrolase
  
  

Gene name	yoqZ
Synonyms
Essential	no
Product	phage-derived gamma polyglutamic acid hydrolase
Function	polyglutamic acid degradation
Gene expression levels in SubtiExpress: yoqZ
MW, pI	30 kDa, 8.586
Gene length, protein length	822 bp, 274 aa
Immediate neighbours	yorA, yoqY
Sequences	Protein DNA DNA_with_flanks
Genetic context This image was kindly provided by SubtiList
Expression at a glance   PubMed

Categories containing this gene/protein

capsule biosynthesis and degradation, SP-beta prophage

The gene

Basic information

• Locus tag: BSU20460

Database entries

• BsubCyc: BSU20460

• DBTBS entry: no entry

• SubtiList entry: [1]

The protein

Basic information/ Evolution

• Catalyzed reaction/ biological activity:

• Protein family:

• Paralogous protein(s):

Extended information on the protein

• Kinetic information:

• Domains:

• Modification:

• Cofactor(s):

• Effectors of protein activity:

• Interactions:

• Localization:

Database entries

• BsubCyc: BSU20460

• Structure:

• UniProt: O31913

• KEGG entry: [2]

• E.C. number:

Expression and regulation

• Operon:

• Expression browser: yoqZ PubMed

• Sigma factor:

• Regulation:

• Regulatory mechanism:

• Additional information:
  • An antisense RNA is predicted for yoqZ PubMed

Biological materials

• Mutant:

• Expression vector:

• lacZ fusion:

• GFP fusion:

• two-hybrid system:

• Antibody:

References

Stefania Mamberti, Paola Prati, Paolo Cremaschi, Claudio Seppi, Carlo F Morelli, Alessandro Galizzi, Massimo Fabbi, Cinzia Calvio
γ-PGA Hydrolases of Phage Origin in Bacillus subtilis and Other Microbial Genomes.
PLoS One: 2015, 10(7);e0130810
[PubMed:26158264] [WorldCat.org] [DOI] (I e)

Irnov Irnov, Cynthia M Sharma, Jörg Vogel, Wade C Winkler
Identification of regulatory RNAs in Bacillus subtilis.
Nucleic Acids Res: 2010, 38(19);6637-51
[PubMed:20525796] [WorldCat.org] [DOI] (I p)