Difference between revisions of "PelC"
| Line 35: | Line 35: | ||
=== Basic information === | === Basic information === | ||
| − | * '''Locus tag:''' | + | * '''Locus tag:''' BSU34950 |
===Phenotypes of a mutant === | ===Phenotypes of a mutant === | ||
| Line 80: | Line 80: | ||
* '''Swiss prot entry:''' [http://www.uniprot.org/uniprot/O34310 O34310] | * '''Swiss prot entry:''' [http://www.uniprot.org/uniprot/O34310 O34310] | ||
| − | * '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu+ | + | * '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu+BSU34950] |
* '''E.C. number:''' [http://www.expasy.org/enzyme/4.2.2.2 4.2.2.2] | * '''E.C. number:''' [http://www.expasy.org/enzyme/4.2.2.2 4.2.2.2] | ||
Revision as of 15:04, 3 June 2009
- Description: pectate lyase C
| Gene name | pelC |
| Synonyms | yvpA |
| Essential | no |
| Product | pectate lyase C |
| Function | degradation of polygalacturonic acid |
| MW, pI | 24 kDa, 9.14 |
| Gene length, protein length | 663 bp, 221 aa |
| Immediate neighbours | yvpB, yvoF |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
The gene
Basic information
- Locus tag: BSU34950
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: Eliminative cleavage of (1->4)-alpha-D-galacturonan to give oligosaccharides with 4-deoxy-alpha-D-galact-4-enuronosyl groups at their non-reducing ends (according to Swiss-Prot)
- Protein family: polysaccharide lyase 3 family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization: secreted (according to Swiss-Prot), extracellular (signal peptide) PubMed
Database entries
- Structure:
- Swiss prot entry: O34310
- KEGG entry: [2]
- E.C. number: 4.2.2.2
Additional information
Expression and regulation
- Operon:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
