Difference between revisions of "PdaA"

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=== Basic information ===
 
=== Basic information ===
  
* '''Locus tag:'''
+
* '''Locus tag:''' BSU07980
  
 
===Phenotypes of a mutant ===
 
===Phenotypes of a mutant ===
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* '''Swiss prot entry:''' [http://www.uniprot.org/uniprot/O34928 O34928]
 
* '''Swiss prot entry:''' [http://www.uniprot.org/uniprot/O34928 O34928]
  
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu+BSU07980 BSU07980]
+
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu+BSU07980]
  
 
* '''E.C. number:'''
 
* '''E.C. number:'''

Revision as of 14:04, 3 June 2009

  • Description: polysaccharide deacetylase, required for germination

Gene name pdaA
Synonyms yfjS
Essential no
Product polysaccharide deacetylase
Function germination
MW, pI 29 kDa, 7.318
Gene length, protein length 789 bp, 263 aa
Immediate neighbours yfjT, yfjR
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YfjS context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Locus tag: BSU07980

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: polysaccharide deacetylase family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

  1. Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed