Difference between revisions of "PdaA"
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|colspan="2" | '''Genetic context''' <br/> [[Image:yfjS_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:yfjS_context.gif]] | ||
<div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div> | <div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div> | ||
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| + | |colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=pdaA_869559_870350_1 Expression at a glance]'''   {{PubMed|22383849}}<br/>[[Image:pdaA_expression.png|500px]] | ||
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Revision as of 17:04, 18 April 2012
- Description: polysaccharide deacetylase, required for germination
| Gene name | pdaA |
| Synonyms | yfjS |
| Essential | no |
| Product | polysaccharide deacetylase |
| Function | germination |
| MW, pI | 29 kDa, 7.318 |
| Gene length, protein length | 789 bp, 263 aa |
| Immediate neighbours | yfjT, yfjR |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU07980
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: polysaccharide deacetylase family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure: 1W17
- UniProt: O34928
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon: pdaA PubMed
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
