Difference between revisions of "PaiB"

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|style="background:#ABCDEF;" align="center"|'''Function''' || regulation of sporulation, degradative enzyme and motility genes
 
|style="background:#ABCDEF;" align="center"|'''Function''' || regulation of sporulation, degradative enzyme and motility genes
 
|-
 
|-
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU32140 paiB]
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU32140 paiB]
 
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 23 kDa, 5.032   
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 23 kDa, 5.032   
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[guaC]]'', ''[[paiA]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[guaC]]'', ''[[paiA]]''
 
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|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB15204&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU32140 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU32140 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU32140 Advanced_DNA]
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:paiB_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:paiB_context.gif]]

Revision as of 13:45, 13 May 2013

  • Description: transcriptional repressor of sporulation and degradative enzyme genes

Gene name paiB
Synonyms yumE
Essential no
Product transcriptional repressor
Function regulation of sporulation, degradative enzyme and motility genes
Gene expression levels in SubtiExpress: paiB
MW, pI 23 kDa, 5.032
Gene length, protein length 621 bp, 207 aa
Immediate neighbours guaC, paiA
Sequences Protein DNA Advanced_DNA
Genetic context
PaiB context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
PaiB expression.png
























Categories containing this gene/protein

transcription factors and their control

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU32140

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: paiB family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References