Difference between revisions of "OpuCB"

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|colspan="2" | '''Genetic context''' <br/> [[Image:opuCB_context.gif]]
 
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|colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=opuCB_3469184_3469837_-1 Expression at a glance]'''&#160;&#160;&#160;{{PubMed|22383849}}<br/>[[Image:opuCB_expression.png|500px]]
 
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Revision as of 09:20, 23 April 2012

Gene name opuCB
Synonyms yvbD
Essential no
Product glycine betaine/carnitine/choline ABC transporter
Function compatible solute transport
Interactions involving this protein in SubtInteract: OpuCB
Metabolic function and regulation of this protein in SubtiPathways:
Stress
MW, pI 23 kDa, 9.705
Gene length, protein length 651 bp, 217 aa
Immediate neighbours opuCC, opuCA
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
OpuCB context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
OpuCB expression.png




























Categories containing this gene/protein

ABC transporters, coping with hyper-osmotic stress, membrane proteins

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU33820

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: CysTW subfamily (according to Swiss-Prot)
  • Paralogous protein(s): OpuBB

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
    • induced by salt stress PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References