Difference between revisions of "OpuBB"

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* '''Operon:''' ''[[opuBA]]-[[opuBB]]-[[opuBC]]-[[opuBD]]'' {{PubMed|10216873}}
 
* '''Operon:''' ''[[opuBA]]-[[opuBB]]-[[opuBC]]-[[opuBD]]'' {{PubMed|10216873}}
  
* '''[[Sigma factor]]:''' [[SigA]] {{PubMed|10216873}}
+
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=opuBB_3461435_3462088_-1 opuBB] {{PubMed|22383849}}
 +
 
 +
* '''Sigma factor:''' [[SigA]] {{PubMed|10216873}}
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  
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** [[GbsR]]: transcription repression {{PubMed|22408163}}
 
** [[GbsR]]: transcription repression {{PubMed|22408163}}
  
* '''Additional information:'''  
+
* '''Additional information:'''
  
 
=Biological materials =
 
=Biological materials =

Revision as of 06:38, 17 April 2012

Gene name opuBB
Synonyms proW
Essential no
Product choline ABC transporter (membrane protein)
Function compatible solute transport
Interactions involving this protein in SubtInteract: OpuBB
Metabolic function and regulation of this protein in SubtiPathways:
Stress
MW, pI 23 kDa, 9.743
Gene length, protein length 651 bp, 217 aa
Immediate neighbours opuBC, opuBA
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
OpuBB context.gif
This image was kindly provided by SubtiList







Categories containing this gene/protein

ABC transporters, coping with hyper-osmotic stress, membrane proteins

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU33720

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: CysTW subfamily (according to Swiss-Prot)
  • Paralogous protein(s): OpuCB

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Additional publications: PubMed

Tamara Hoffmann, Erhard Bremer
Protection of Bacillus subtilis against cold stress via compatible-solute acquisition.
J Bacteriol: 2011, 193(7);1552-62
[PubMed:21296969] [WorldCat.org] [DOI] (I p)

R M Kappes, B Kempf, S Kneip, J Boch, J Gade, J Meier-Wagner, E Bremer
Two evolutionarily closely related ABC transporters mediate the uptake of choline for synthesis of the osmoprotectant glycine betaine in Bacillus subtilis.
Mol Microbiol: 1999, 32(1);203-16
[PubMed:10216873] [WorldCat.org] [DOI] (P p)

Y Quentin, G Fichant, F Denizot
Inventory, assembly and analysis of Bacillus subtilis ABC transport systems.
J Mol Biol: 1999, 287(3);467-84
[PubMed:10092453] [WorldCat.org] [DOI] (P p)

G Nau-Wagner, J Boch, Le Good JA, E Bremer
High-affinity transport of choline-O-sulfate and its use as a compatible solute in Bacillus subtilis.
Appl Environ Microbiol: 1999, 65(2);560-8
[PubMed:9925583] [WorldCat.org] [DOI] (P p)