Difference between revisions of "OppF"
| Line 30: | Line 30: | ||
<div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div> | <div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div> | ||
|- | |- | ||
| − | |colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=oppF_1224533_1225450_1 Expression at a glance]'''   {{PubMed|22383849}}<br/>[[Image:oppF_expression.png|500px]] | + | |colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=oppF_1224533_1225450_1 Expression at a glance]'''   {{PubMed|22383849}}<br/>[[Image:oppF_expression.png|500px|link=http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU11470]] |
|- | |- | ||
|} | |} | ||
Revision as of 12:58, 16 May 2013
- Description: oligopeptide ABC transporter (ATP-binding protein)
| Gene name | oppF |
| Synonyms | spo0KE |
| Essential | no |
| Product | oligopeptide ABC transporter (ATP-binding protein) |
| Function | initiation of sporulation, competence development |
| Gene expression levels in SubtiExpress: oppF | |
| Interactions involving this protein in SubtInteract: OppF | |
| Metabolic function and regulation of this protein in SubtiPathways: Alternative nitrogen sources | |
| MW, pI | 34 kDa, 6.95 |
| Gene length, protein length | 915 bp, 305 aa |
| Immediate neighbours | oppD, yjbB |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
ABC transporters, utilization of nitrogen sources other than amino acids, genetic competence, phosphorelay, membrane proteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU11470
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: ABC transporter domain (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization: attached to the cell membrane (via OppB-OppC) PubMed
Database entries
- Structure:
- UniProt: P24137
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Sigma factor:
- Regulation:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Additional publications: PubMed
