Difference between revisions of "Ndh"

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(Expression and regulation)
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* '''Regulation:'''  
 
* '''Regulation:'''  
** repressed at regular oxygen concentration ([[Rex]]) [http://www.ncbi.nlm.nih.gov/sites/entrez/17015645 PubMed]
+
** induced under anaerobic conditions ([[Rex]]) [http://www.ncbi.nlm.nih.gov/sites/entrez/17015645 PubMed]
  
 
* '''Regulatory mechanism:'''  
 
* '''Regulatory mechanism:'''  
** [[Rex]]: transcription activation [http://www.ncbi.nlm.nih.gov/sites/entrez/17015645 PubMed]
+
** [[Rex]]: transcription repression [http://www.ncbi.nlm.nih.gov/sites/entrez/17015645 PubMed]
  
* '''Additional information:'''  
+
* '''Additional information:'''
  
 
=Biological materials =
 
=Biological materials =

Revision as of 05:09, 12 June 2009

  • Description: NADH dehydrogenase (Menaquinone 7 & no proton)

Gene name ndh
Synonyms yjlD
Essential no
Product NADH dehydrogenase (Menaquinone 7 & no proton)
Function respiration
MW, pI 41 kDa, 6.289
Gene length, protein length 1176 bp, 392 aa
Immediate neighbours adaB, ybcC
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YjlD context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Locus tag: BSU12290

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: NADH dehydrogenase family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization: membrane associated PubMed

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Regulation:
    • induced under anaerobic conditions (Rex) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Hannes Hahne, Susanne Wolff, Michael Hecker, Dörte Becher
From complementarity to comprehensiveness--targeting the membrane proteome of growing Bacillus subtilis by divergent approaches.
Proteomics: 2008, 8(19);4123-36
[PubMed:18763711] [WorldCat.org] [DOI] (I p)

  1. Hahne et al. (2008) From complementarity to comprehensiveness - targeting the membrane proteome of growing Bacillus subtilis by divergent approaches. Proteomics 8: 4123-4136 PubMed
  2. Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed