Difference between revisions of "MutY"

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= [[Categories]] containing this gene/protein =
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{{SubtiWiki category|[[DNA repair/ recombination]]}}
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= This gene is a member of the following [[regulons]] =
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{{SubtiWiki regulon|[[YfhP regulon]]}}
  
 
=The gene=
 
=The gene=
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= Categories containing this gene/protein =
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{{SubtiWiki category|[[DNA repair/ recombination]]}}
 
 
=The protein=
 
=The protein=
  

Revision as of 13:19, 9 December 2010

  • Description: A/G-specific adenine glycosylase, error prevention oxidized guanine system, releases adenines from 8-oxo-G:A mismatches

Gene name yfhQ
Synonyms
Essential no
Product A/G-specific adenine glycosylase
Function DNA repair
Metabolic function and regulation of this protein in SubtiPathways:
Lipid synthesis
MW, pI 41 kDa, 6.044
Gene length, protein length 1107 bp, 369 aa
Immediate neighbours yfhP, yfhS
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YfhQ context.gif
This image was kindly provided by SubtiList







Categories containing this gene/protein

DNA repair/ recombination

This gene is a member of the following regulons

YfhP regulon

The gene

Basic information

  • Locus tag: BSU08630

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: releases adenines from 8-oxo-G:A mismatches
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure: 1RRS (complex with DNA, Geobacillus stearothermophilus)
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • expression is constitutive throughout growth PubMed
    • expression is fivefold increased in a mutS-mutL mutant PubMed
    • YfhP may act as a negative transcription regulator of the mutY-fabL-sspE operon during exponential growth PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Luz E Vidales, Lluvia C Cárdenas, Eduardo Robleto, Ronald E Yasbin, Mario Pedraza-Reyes
Defects in the error prevention oxidized guanine system potentiate stationary-phase mutagenesis in Bacillus subtilis.
J Bacteriol: 2009, 191(2);506-13
[PubMed:19011023] [WorldCat.org] [DOI] (I p)

Hiroki Yamamoto, Masao Mori, Junichi Sekiguchi
Transcription of genes near the sspE locus of the Bacillus subtilis genome.
Microbiology (Reading): 1999, 145 ( Pt 8);2171-2180
[PubMed:10463184] [WorldCat.org] [DOI] (P p)

Additional publications: PubMed