Difference between revisions of "MsmX"

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(Database entries)
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=Expression and regulation=
 
=Expression and regulation=
 
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* '''Operon:''' ''[[yxkF]]-[[msmX]]'' {{PubMed|10746760}}
* '''Operon:''' ''[[yxkF]]-[[msmX]]'' [http://www.ncbi.nlm.nih.gov/sites/entrez/10746760 PubMed]
 
  
 
* '''[[Sigma factor]]:'''  
 
* '''[[Sigma factor]]:'''  
  
* '''Regulation:''' repressed by glucose ([[CcpA]])   
+
* '''Regulation:'''  
 +
** repressed by glucose ([[CcpA]])  {{PubMed|10666464}}
  
* '''Regulatory mechanism:''' [[CcpA]]: transcription repression  
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* '''Regulatory mechanism:'''  
 +
** [[CcpA]]: transcription repression {{PubMed|10666464}}
  
 
* '''Additional information:'''
 
* '''Additional information:'''
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=References=
 
=References=
  
<pubmed>10092453,16672620,,16707683, </pubmed>
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<pubmed>10092453,16672620,10746760,16707683,10666464  </pubmed>
  
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 10:09, 7 February 2010

Gene name msmX
Synonyms yxkG
Essential no
Product multiple sugar ABC transporter (ATP-binding protein)
Function maltodextrin and melibiose (probably) uptake
Metabolic function and regulation of this protein in SubtiPathways:
Sugar catabolism
MW, pI 41 kDa, 7.385
Gene length, protein length 1095 bp, 365 aa
Immediate neighbours yxkH, yxkF
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
MsmX context.gif
This image was kindly provided by SubtiList







The gene

Basic information

  • Locus tag: BSU38810

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: ABC transporter family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization: cell membrane (according to Swiss-Prot)

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Stefan Schönert, Sabine Seitz, Holger Krafft, Eva-Anne Feuerbaum, Iris Andernach, Gabriele Witz, Michael K Dahl
Maltose and maltodextrin utilization by Bacillus subtilis.
J Bacteriol: 2006, 188(11);3911-22
[PubMed:16707683] [WorldCat.org] [DOI] (P p)

Juliane Ollinger, Kyung-Bok Song, Haike Antelmann, Michael Hecker, John D Helmann
Role of the Fur regulon in iron transport in Bacillus subtilis.
J Bacteriol: 2006, 188(10);3664-73
[PubMed:16672620] [WorldCat.org] [DOI] (P p)

Ken-Ichi Yoshida, Izumi Ishio, Eishi Nagakawa, Yoshiyuki Yamamoto, Mami Yamamoto, Yasutaro Fujita
Systematic study of gene expression and transcription organization in the gntZ-ywaA region of the Bacillus subtilis genome.
Microbiology (Reading): 2000, 146 ( Pt 3);573-579
[PubMed:10746760] [WorldCat.org] [DOI] (P p)

Y Miwa, A Nakata, A Ogiwara, M Yamamoto, Y Fujita
Evaluation and characterization of catabolite-responsive elements (cre) of Bacillus subtilis.
Nucleic Acids Res: 2000, 28(5);1206-10
[PubMed:10666464] [WorldCat.org] [DOI] (I p)

Y Quentin, G Fichant, F Denizot
Inventory, assembly and analysis of Bacillus subtilis ABC transport systems.
J Mol Biol: 1999, 287(3);467-84
[PubMed:10092453] [WorldCat.org] [DOI] (P p)