Difference between revisions of "MenF"

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(Database entries)
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=== Database entries ===
 
=== Database entries ===
  
* '''Structure:'''
+
* '''Structure:''' [http://www.rcsb.org/pdb/cgi/explore.cgi?pdbId=3BZM 3BZM] (from ''Escherichia coli'', 33% identity, 51% similarity) {{PubMed|18453696}}
  
 
* '''UniProt:''' [http://www.uniprot.org/uniprot/P23973 P23973]
 
* '''UniProt:''' [http://www.uniprot.org/uniprot/P23973 P23973]

Revision as of 15:56, 18 February 2010

  • Description: menaquinone-specific isochorismate synthase

Gene name menF
Synonyms icsM, entC
Essential no
Product menaquinone-specific isochorismate synthase
Function biosynthesis of menaquinone
Metabolic function and regulation of this protein in SubtiPathways:
Phe, Tyr, Trp, Menaquinone
MW, pI 52 kDa, 4.706
Gene length, protein length 1413 bp, 471 aa
Immediate neighbours menD, yteA
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
MenF context.gif
This image was kindly provided by SubtiList







The gene

Basic information

  • Locus tag: BSU30830

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: Chorismate = isochorismate (according to Swiss-Prot)
  • Protein family: isochorismate synthase family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure: 3BZM (from Escherichia coli, 33% identity, 51% similarity) PubMed
  • KEGG entry: [3]

Additional information

Expression and regulation

  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Alia Lapidus, Nathalie Galleron, Alexei Sorokin, S Dusko Ehrlich
Sequencing and functional annotation of the Bacillus subtilis genes in the 200 kb rrnB-dnaB region.
Microbiology (Reading): 1997, 143 ( Pt 11);3431-3441
[PubMed:9387221] [WorldCat.org] [DOI] (P p)

X Qin, H W Taber
Transcriptional regulation of the Bacillus subtilis menp1 promoter.
J Bacteriol: 1996, 178(3);705-13
[PubMed:8550504] [WorldCat.org] [DOI] (P p)

J R Driscoll, H W Taber
Sequence organization and regulation of the Bacillus subtilis menBE operon.
J Bacteriol: 1992, 174(15);5063-71
[PubMed:1629163] [WorldCat.org] [DOI] (P p)