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Ice Cube s hit, Why We Thugs, explains the vicious system that was created by men who now claim to protect average citizens from a violent society that originated from their own policies.  
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<big>Welcome to '''''Subti''Wiki'''! </big> - ''Bacillus subtilis'' annotation the "wiki" way!<br/>
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Remember that pirating music that has been released for purchase is illegal. Unless a musician releases something for free, you should be supporting them and purchasing their music. Now that you know how to download mixtapes, go out there and find some new artists that you like.  
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[[File:Start_page_small.png|right|link=http://www.subtiwiki.uni-goettingen.de/]]
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The ghetto is a place most people are trying to leave, it is not a pleasant place to stay. The most realistic description of the ghetto as a whole is Grandmaster Flash s. Broken glass everywhere, piss on the floor, living on the edge...welcome to the jungle.
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[[File:Playground_small.png|right|link=http://www.subtiwiki.uni-goettingen.de/wiki/index.php/Playground]]
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Ice Cube s hit, Why We Thugs, explains the vicious system that was created by men who now claim to protect average citizens from a violent society that originated from their own policies.  
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[[File:Wish_List_small.png|right|link=http://www.subtiwiki.uni-goettingen.de/wiki/index.php/Wish_List]]
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Remember that pirating music that has been released for purchase is illegal. Unless a musician releases something for free, you should be supporting them and purchasing their music. Now that you know how to download mixtapes, go out there and find some new artists that you like.  
+
<br/>
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The ghetto is a place most people are trying to leave, it is not a pleasant place to stay. The most realistic description of the ghetto as a whole is Grandmaster Flash s. Broken glass everywhere, piss on the floor, living on the edge...welcome to the jungle.  
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<big>'''Contact:'''</big> [http://wwwuser.gwdg.de/~genmibio/stuelke.html General Microbiology, University of Göttingen], [mailto:jstuelk@gwdg.de send mail]
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Some people do think that hip hop is only about big money, big jewels, hoes and big cars. Some teenagers think they are hip hop because they dress hip hop and because they listen to mainstream rappers.  
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Doing 100's of crunches or tummy tucks, tilts, is not going to help you lose weight. Yeah you might see your abs, but faintly. You won't see your abs if it's surrounded by fat, which is what you need to lose before you can actually see them. If you want to see your abs you really need to know when to implement your cardio and you need to know how and what to eat. That is the sole reason why so many other plans fail and why people end up so frustrated with themselves and their attempts. I'll be the first to congratulate you for your efforts but some programs simply don't work. Not only that they don't give the right instructions for weight loss. What we need is the right knowledge on weight loss, not more misleading fitness programs.
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How many people have dealt there with loads of unpleasant situations, trying to make the best out of their circumstances?
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<big>'''Upcoming events:'''</big>
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No matter how much people want to shut down the messenger, hip hop s message won t be overheard.[http://wiki.denimdebutante.com/?title=User:TylerRosaline8933 hip hop torrents]
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* The [http://www.bacillus-2017.de/ 19th International Conference on Bacilli & Gram-Positive Bacteria] organized by [[Jörg Stülke]] will take place from June 11 to June 15, 2017, in Berlin, Germany. [http://www.bacillus-2017.de/ Conference website]
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I have been reviewing many products for my clients. I must say the product can work but requires some good effort. If you haven't worked out before no matter what program you try, it will help some what. The fact is that all the exercise in the world isn't going to get you into the best shape of your life, nor will it get you a six pack. That's where many people go wrong; you need to incorporate good eating habits with any program. The fact is that the program does come with some nutritional help but I feel it isn't enough to really give you an understanding how important it really is. I have had another client ask me about another program called the truth about six pack abs. I had a chance to look at it and I have been very pleased with it.
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* [[Past conferences]]
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Some people do think that hip hop is only about big money, big jewels, hoes and big cars. Some teenagers think they are hip hop because they dress hip hop and because they listen to mainstream rappers.
+
 
−
Doing 100's of crunches or tummy tucks, tilts, is not going to help you lose weight. Yeah you might see your abs, but faintly. You won't see your abs if it's surrounded by fat, which is what you need to lose before you can actually see them. If you want to see your abs you really need to know when to implement your cardio and you need to know how and what to eat. That is the sole reason why so many other plans fail and why people end up so frustrated with themselves and their attempts. I'll be the first to congratulate you for your efforts but some programs simply don't work. Not only that they don't give the right instructions for weight loss. What we need is the right knowledge on weight loss, not more misleading fitness programs.
+
<br/>
−
How many people have dealt there with loads of unpleasant situations, trying to make the best out of their circumstances?
+
<big>'''New: Subtiwiki is now on [http://www.facebook.com/pages/SubtiWiki/201847669864806 Facebook] - please give it a +1!'''</big>
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No matter how much people want to shut down the messenger, hip hop s message won t be overheard. [http://wiki.denimdebutante.com/?title=User:TylerRosaline8933 hip hop torrents]
+
 
−
I have been reviewing many products for my clients. I must say the product can work but requires some good effort. If you haven't worked out before no matter what program you try, it will help some what. The fact is that all the exercise in the world isn't going to get you into the best shape of your life, nor will it get you a six pack. That's where many people go wrong; you need to incorporate good eating habits with any program. The fact is that the program does come with some nutritional help but I feel it isn't enough to really give you an understanding how important it really is. I have had another client ask me about another program called the truth about six pack abs. I had a chance to look at it and I have been very pleased with it.
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 +
<br/>
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<big>'''Now online: A new description of ''Subti''Wiki and its acompanying modules in the [https://academic.oup.com/nar/article-lookup/doi/10.1093/nar/gkv1006 2016 Database issue of Nucleic Acids Research]'''</big>
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<pubmed> 24178028 </pubmed>
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<br/>
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<big>'''Paper of the month: August 2015'''</big>
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* The cells in a biofilm experience very different conditions: While the inner cells are well protected from any harm from the environment, they have on the other hand only poor access to nutrients. For the cells on the edge of the biofilm, it is just the other way round. Now, [http://www.ncbi.nlm.nih.gov/pubmed/26200335 Liu et al.] from the lab of [[Gürol M. Süel]] have discovered oscillation in the [[biofilm formation|growth of the biofilm]]. These oscillations serve to provide the inner cells with access to nutrients. These oscillations are caused by metabolic co-dependence between cells in the biofilm periphery and interior that is driven by [[glutamate metabolism|glutamate consumption and ammonium production]], respectively.
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* '''Relevant ''Subti''Wiki pages:''' [[Gürol M. Süel]], [[glutamate metabolism|glutamate consumption and ammonium production]], [[biofilm formation]]
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* see [http://microbepost.org/2015/08/05/conflict-and-co-operation-in-bacterial-communities/ a blog presenting this paper]
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<pubmed>26200335</pubmed>
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* [[Previous papers of the month]]
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<br/>
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<big>'''New procedure for account creation:'''</big>
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* Due to massive spam attacks, we had to change our policy for the creation of accounts. If you want to create an account, just [mailto:jstuelk@gwdg.de send me a mail]. We will create the account for you as quickly as possible, then you can change your password. This does not affect existing accounts, which remain active. <br/>
 +
* '''Please remember that all members of the ''Bacillus'' community are invited to create accounts and to contribute to ''Subti''Wiki!'''
 +
<br/><br/>
 +
<big>'''News in ''Subti''Wiki:'''</big>
 +
* '''August 2014:''' The first mobile application for ''Subti''Wiki is now available for users of Android phones: Go for SubtiWiki in Google Play! IPhone users, please be patient! You will be served next! [https://play.google.com/store/apps/details?id=de.goettingen.uni.genmibio.subtimobile&hl=en Click here to install!]
 +
* '''April 2013:''' SubtiWiki uses a new, faster Mediawiki platform! The times for page access are significantly reduced. Enjoy!
 +
* '''March 2013:''' updated Excel files that map all genes to [[categories]] and [[regulons]] as well as the general updated [http://www.subtiwiki.uni-goettingen.de/wiki/index.php/File:SubtiWiki_id_mapping.xls identity mapping] of all genes were uploaded.
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* '''October 2012''': the [[essential genes]] have been categorized
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* '''September 2012''': 300 mutant strains available at the [http://www.bgsc.org BGSC] were added to the corresponding gene pages
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* '''August 2012''': [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express], the new compagnon of ''Subti''Wiki devoted to gene expression is online! Try it out!
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* '''April 2012:''' Links for expression data under 104 different conditions (based on [http://www.ncbi.nlm.nih.gov/pubmed/22383849 Nicolas ''et al''., 2012]) have been added to the expression section of the individual gene pages
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* '''April 2011:''' [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact], a presentation of [[protein-protein interactions]] in ''B. subtilis'', is online!
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* '''December 2010:''' [http://cellpublisher.gobics.de/scp.html SubtiCellPublisher] allows the conversion of CellDesigner diagrams to navigatable presentations in the style of [[SubtiPathways]]
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<br/>
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{| border="0" cellpadding="1"
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|width="300"|<big>'''Genes''' (examples)</big>
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|width="300"|<big>'''Additional pages'''</big>
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|- style="height:20px"
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| ''[[spo0A]]'' || '''[[template]]'''
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|-
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| ''[[glnA]]'' ||  '''[[the people behind SubtiWiki|the people behind ''Subti''Wiki]]'''
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|-
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| ''[[rny]]'' ||  '''[[labs working on Bacillus|labs working on ''Bacillus'']]'''
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|-
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| ''[[psdA]]'' || '''[[Regulons]]'''
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|-
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| ''[[pckA]]'' || '''[[methods]]'''
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|-
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| ''[[dnaA]]'' ||  '''[[metabolism]]'''
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|-
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| ''[[rnpA]]'' ||  '''[[categories]]'''
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|-
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| ''[[sigB]]'' || '''[[genome-wide analyses]]'''
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|-
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| ''[[ptkA]]'' || '''[[list of plasmids]]'''
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|-
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| ''[[mreC]]'' || '''[[labs working on Bacillus|labs working on ''Bacillus'']]'''
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|-
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|  ||
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|}
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<br>
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<big>'''Publications describing ''Subti''Wiki and ''Subti''Pathways:'''</big>
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<div style="width:73%"><pubmed>20157485 19959575 22096228 24178028 </pubmed></div>
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<br><br><br><br><br><br>

Latest revision as of 10:15, 22 February 2017

Welcome to SubtiWiki! - Bacillus subtilis annotation the "wiki" way!

Start page small.png
Playground small.png
Wish List small.png


Contact: General Microbiology, University of Göttingen, send mail


Upcoming events:


New: Subtiwiki is now on Facebook - please give it a +1!



Now online: A new description of SubtiWiki and its acompanying modules in the 2016 Database issue of Nucleic Acids Research

Raphael H Michna, Fabian M Commichau, Dominik Tödter, Christopher P Zschiedrich, Jörg Stülke
SubtiWiki-a database for the model organism Bacillus subtilis that links pathway, interaction and expression information.
Nucleic Acids Res: 2014, 42(Database issue);D692-8
[PubMed:24178028] [WorldCat.org] [DOI] (I p)



Paper of the month: August 2015

Jintao Liu, Arthur Prindle, Jacqueline Humphries, Marçal Gabalda-Sagarra, Munehiro Asally, Dong-yeon D Lee, San Ly, Jordi Garcia-Ojalvo, Gürol M Süel
Metabolic co-dependence gives rise to collective oscillations within biofilms.
Nature: 2015, 523(7562);550-4
[PubMed:26200335] [WorldCat.org] [DOI] (I p)


New procedure for account creation:

  • Due to massive spam attacks, we had to change our policy for the creation of accounts. If you want to create an account, just send me a mail. We will create the account for you as quickly as possible, then you can change your password. This does not affect existing accounts, which remain active.
  • Please remember that all members of the Bacillus community are invited to create accounts and to contribute to SubtiWiki!



News in SubtiWiki:

  • August 2014: The first mobile application for SubtiWiki is now available for users of Android phones: Go for SubtiWiki in Google Play! IPhone users, please be patient! You will be served next! Click here to install!
  • April 2013: SubtiWiki uses a new, faster Mediawiki platform! The times for page access are significantly reduced. Enjoy!
  • March 2013: updated Excel files that map all genes to categories and regulons as well as the general updated identity mapping of all genes were uploaded.
  • October 2012: the essential genes have been categorized
  • September 2012: 300 mutant strains available at the BGSC were added to the corresponding gene pages
  • August 2012: SubtiExpress, the new compagnon of SubtiWiki devoted to gene expression is online! Try it out!
  • April 2012: Links for expression data under 104 different conditions (based on Nicolas et al., 2012) have been added to the expression section of the individual gene pages
  • April 2011: SubtInteract, a presentation of protein-protein interactions in B. subtilis, is online!
  • December 2010: SubtiCellPublisher allows the conversion of CellDesigner diagrams to navigatable presentations in the style of SubtiPathways



Genes (examples) Additional pages
spo0A template
glnA the people behind SubtiWiki
rny labs working on Bacillus
psdA Regulons
pckA methods
dnaA metabolism
rnpA categories
sigB genome-wide analyses
ptkA list of plasmids
mreC labs working on Bacillus


Publications describing SubtiWiki and SubtiPathways:

Raphael H Michna, Fabian M Commichau, Dominik Tödter, Christopher P Zschiedrich, Jörg Stülke
SubtiWiki-a database for the model organism Bacillus subtilis that links pathway, interaction and expression information.
Nucleic Acids Res: 2014, 42(Database issue);D692-8
[PubMed:24178028] [WorldCat.org] [DOI] (I p)

Ulrike Mäder, Arne G Schmeisky, Lope A Flórez, Jörg Stülke
SubtiWiki--a comprehensive community resource for the model organism Bacillus subtilis.
Nucleic Acids Res: 2012, 40(Database issue);D1278-87
[PubMed:22096228] [WorldCat.org] [DOI] (I p)

Lope A Flórez, Sebastian F Roppel, Arne G Schmeisky, Christoph R Lammers, Jörg Stülke
A community-curated consensual annotation that is continuously updated: the Bacillus subtilis centred wiki SubtiWiki.
Database (Oxford): 2009, 2009;bap012
[PubMed:20157485] [WorldCat.org] [DOI] (I p)

Christoph R Lammers, Lope A Flórez, Arne G Schmeisky, Sebastian F Roppel, Ulrike Mäder, Leendert Hamoen, Jörg Stülke
Connecting parts with processes: SubtiWiki and SubtiPathways integrate gene and pathway annotation for Bacillus subtilis.
Microbiology (Reading): 2010, 156(Pt 3);849-859
[PubMed:19959575] [WorldCat.org] [DOI] (I p)







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