Difference between revisions of "Main Page"

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<big>'''Paper of the month: October 2011'''</big>  
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<big>'''Paper of the month: November 2011'''</big>  
* [http://www.ncbi.nlm.nih.gov/pubmed/21925382 Richards ''et al''.] identify the [[nudix hydrolase]] [[RppH]] as the pyrophosphohydrolase that triggers 5'-exonucleolytic degradation of mRNA by [[rnjA|RNase J1]] in ''B. subtilis''.
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* [http://www.ncbi.nlm.nih.gov/pubmed/21979936 Locke ''et al''.] show how the [[SigB]]-dependent general stress response is controlled by signals using stochastic pulse frequency modulation through a compact regulatory architecture.
* '''Relevant ''Subti''Wiki pages:'''  [[David Bechhofer]], [[Ciaran Condon]], [[RNases|RNA processing and degradation]], [[nudix hydrolase]], [[RppH]], [[rnjA|RNase J1]]
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* '''Relevant ''Subti''Wiki pages:'''  [[Michael Elowitz]], [[SigB]], [[General stress proteins (controlled by SigB)|General stress response]]  
<pubmed>21925382</pubmed>
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<big>''Locke JC, Young JW, Fontes M, Hernández Jiménez MJ, Elowitz MB''  </big>
* [[Previous papers of the month]]
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<big>'''Stochastic pulse regulation in bacterial stress response.''' </big>
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<big>Science. 2011 334:366-369. </big>
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[http://www.ncbi.nlm.nih.gov/pubmed/21979936 PubMed:21979936]
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Revision as of 09:56, 31 October 2011

Welcome to SubtiWiki! - Bacillus subtilis annotation the "wiki" way!

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Contact: General Microbiology, University of Göttingen, send mail


Upcoming events:

  • April 16 - 19, 2012: The 5th European Spore Conference will take place in London, UK. contact, conference website
  • April 24 - 25, 2012: The BACELL meeting 2012 will be organized by Kevin Devine in Dublin, Ireland. contact

Past conferences


New: Subtiwiki is now on Facebook - please give it a +1!


Paper of the month: November 2011

Locke JC, Young JW, Fontes M, Hernández Jiménez MJ, Elowitz MB  
Stochastic pulse regulation in bacterial stress response. 
Science. 2011 334:366-369. 
PubMed:21979936



New procedure for account creation:

  • Due to massive spam attacks, we had to change our policy for the creation of accounts. If you want to create an account, just send me a mail. We will create the account for you as quickly as possible, then you can change your password. This does not affect existing accounts, which remain active.
  • Please remember that all members of the Bacillus community are invited to create accounts and to contribute to SubtiWiki!



News in SubtiWiki:


Genes (examples) Additional pages
spo0A SubtiPathways
glnA Lists of genes, proteins and RNAs
rny Categories
psdA Regulons
pckA methods
dnaA metabolism
rnpA protein-protein interactions
sigB genome-wide analyses
ptkA list of plasmids
mreC labs working on Bacillus
ccpA the people behind SubtiWiki
sr1 template


Publications describing SubtiWiki and SubtiPathways:

Lope A Flórez, Sebastian F Roppel, Arne G Schmeisky, Christoph R Lammers, Jörg Stülke
A community-curated consensual annotation that is continuously updated: the Bacillus subtilis centred wiki SubtiWiki.
Database (Oxford): 2009, 2009;bap012
[PubMed:20157485] [WorldCat.org] [DOI] (I p)

Christoph R Lammers, Lope A Flórez, Arne G Schmeisky, Sebastian F Roppel, Ulrike Mäder, Leendert Hamoen, Jörg Stülke
Connecting parts with processes: SubtiWiki and SubtiPathways integrate gene and pathway annotation for Bacillus subtilis.
Microbiology (Reading): 2010, 156(Pt 3);849-859
[PubMed:19959575] [WorldCat.org] [DOI] (I p)