Difference between revisions of "Main Page"

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<big>'''News in ''Subti''Wiki:'''</big>  
 
<big>'''News in ''Subti''Wiki:'''</big>  
* '''December 2010:''' the beta  version of an interactive protein-protein interaction map is available [http://cellpublisher.gobics.de/subtinteract/interactionList/PtsH here] (just replace "PtsH" in the browser line by thee protein of your interest)
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* '''December 2010:''' the beta  version of an interactive protein-protein interaction map is available [http://cellpublisher.gobics.de/subtinteract/interactionList/PtsH here] (just replace "PtsH" in the browser line by the protein of your interest)
* '''December 2010:''' [http://cellpublisher.gobics.de/scp.html SubtiCellPublisher] allows the conversion of CellDesigner diagrams to navigatable presentations in the style of [[''Subti''Pathways]]
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* '''December 2010:''' [http://cellpublisher.gobics.de/scp.html SubtiCellPublisher] allows the conversion of CellDesigner diagrams to navigatable presentations in the style of [[SubtiPathways]]
 
* '''December 2010:''' all genes are linked to [[regulons]], and the pages of the [[regulons]] provide an overview on all genes that are members of this specific regulon.
 
* '''December 2010:''' all genes are linked to [[regulons]], and the pages of the [[regulons]] provide an overview on all genes that are members of this specific regulon.
 
* '''December 2010:''' all genes/proteins are linked to [[categories]], and the pages of the [[categories]] provide an overview on all genes/proteins that are members of this specific category.
 
* '''December 2010:''' all genes/proteins are linked to [[categories]], and the pages of the [[categories]] provide an overview on all genes/proteins that are members of this specific category.

Revision as of 13:09, 10 December 2010

Welcome to SubtiWiki! - Bacillus subtilis annotation the "wiki" way!

Start page small.png
Playground small.png
Wish List small.png


Contact: General Microbiology, University of Göttingen, send mail


Upcoming events:

  • March 14 - 16, 2011: The European BACELL meeting will take place in Göttingen, Germany. contact
  • June 2011: The 16th International Conference on Bacilli (aka 6th International Conference on Gram-positive Microorganisms) will take place in lovely Tuscany, Italy. Conference website


News in SubtiWiki:


Genes (examples) Additional pages
spo0A SubtiPathways
glnA Lists of genes, proteins and RNAs
rny Categories
pckA methods
dnaA metabolism
sigB genome-wide analyses
ptkA list of plasmids
mreC labs working on Bacillus
ccpA the people behind SubtiWiki
sr1 templates
Classification of genes


Publications describing SubtiWiki and SubtiPathways:

Lope A Flórez, Sebastian F Roppel, Arne G Schmeisky, Christoph R Lammers, Jörg Stülke
A community-curated consensual annotation that is continuously updated: the Bacillus subtilis centred wiki SubtiWiki.
Database (Oxford): 2009, 2009;bap012
[PubMed:20157485] [WorldCat.org] [DOI] (I p)

Christoph R Lammers, Lope A Flórez, Arne G Schmeisky, Sebastian F Roppel, Ulrike Mäder, Leendert Hamoen, Jörg Stülke
Connecting parts with processes: SubtiWiki and SubtiPathways integrate gene and pathway annotation for Bacillus subtilis.
Microbiology (Reading): 2010, 156(Pt 3);849-859
[PubMed:19959575] [WorldCat.org] [DOI] (I p)