Difference between revisions of "Main Page"
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<big>'''Upcoming events:'''</big> | <big>'''Upcoming events:'''</big> | ||
| − | * '''March 14 - 16, 2011:''' The European [http://www.bacell.eu BACELL] meeting will take place in Göttingen, Germany. | + | * '''March 14 - 16, 2011:''' The European [http://www.bacell.eu BACELL] meeting will take place in Göttingen, Germany. [mailto:jstuelk@gwdg.de contact] |
* '''June 2011:''' The 16th International Conference on Bacilli (aka 6th International Conference on Gram-positive Microorganisms) will take place in lovely Tuscany, Italy. [http://www.grampositiveconference.org/index.html Conference website] | * '''June 2011:''' The 16th International Conference on Bacilli (aka 6th International Conference on Gram-positive Microorganisms) will take place in lovely Tuscany, Italy. [http://www.grampositiveconference.org/index.html Conference website] | ||
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<big>'''News in ''Subti''Wiki:'''</big> | <big>'''News in ''Subti''Wiki:'''</big> | ||
| + | * '''December 2010:''' the beta version of an interactive protein-protein interaction map is available [http://cellpublisher.gobics.de/subtinteract/interactionList/PtsH here] (just replace "PtsH" in the browser line by thee protein of your interest) | ||
| + | * '''December 2010:''' [http://cellpublisher.gobics.de/scp.html SubtiCellPublisher] allows the conversion of CellDesigner diagrams to navigatable presentations in the style of [[''Subti''Pathways]] | ||
* '''December 2010:''' all genes are linked to [[regulons]], and the pages of the [[regulons]] provide an overview on all genes that are members of this specific regulon. | * '''December 2010:''' all genes are linked to [[regulons]], and the pages of the [[regulons]] provide an overview on all genes that are members of this specific regulon. | ||
* '''December 2010:''' all genes/proteins are linked to [[categories]], and the pages of the [[categories]] provide an overview on all genes/proteins that are members of this specific category. | * '''December 2010:''' all genes/proteins are linked to [[categories]], and the pages of the [[categories]] provide an overview on all genes/proteins that are members of this specific category. | ||
Revision as of 13:08, 10 December 2010
Welcome to SubtiWiki! - Bacillus subtilis annotation the "wiki" way!
Contact: General Microbiology, University of Göttingen, send mail
Upcoming events:
- March 14 - 16, 2011: The European BACELL meeting will take place in Göttingen, Germany. contact
- June 2011: The 16th International Conference on Bacilli (aka 6th International Conference on Gram-positive Microorganisms) will take place in lovely Tuscany, Italy. Conference website
News in SubtiWiki:
- December 2010: the beta version of an interactive protein-protein interaction map is available here (just replace "PtsH" in the browser line by thee protein of your interest)
- December 2010: SubtiCellPublisher allows the conversion of CellDesigner diagrams to navigatable presentations in the style of ''Subti''Pathways
- December 2010: all genes are linked to regulons, and the pages of the regulons provide an overview on all genes that are members of this specific regulon.
- December 2010: all genes/proteins are linked to categories, and the pages of the categories provide an overview on all genes/proteins that are members of this specific category.
- November 2010: a beta version of SubtInteract is online
- August 2010: several new pathway maps including Utilization of other nitrogen sources, Biotin synthesis, Murein recycling, and Protein secretion were uploaded to SubtiPathways
- July 2010: A manually curated functional classification of Bacillus genes can be downloaded here.
- March 2010: novel plasmids for the creation of strains expressing proteins with a C-terminal triple FLAG-tag (for simple immunological analysis of the proteins, pGP1087 and pGP1331)
- February 2010: several new pathway maps including lipid biosynthesis, fatty acid degradation, control of biofilm formation and phosphorelay were uploaded to SubtiPathways
Publications describing SubtiWiki and SubtiPathways:
Lope A Flórez, Sebastian F Roppel, Arne G Schmeisky, Christoph R Lammers, Jörg Stülke
A community-curated consensual annotation that is continuously updated: the Bacillus subtilis centred wiki SubtiWiki.
Database (Oxford): 2009, 2009;bap012
[PubMed:20157485]
[WorldCat.org]
[DOI]
(I p)
Christoph R Lammers, Lope A Flórez, Arne G Schmeisky, Sebastian F Roppel, Ulrike Mäder, Leendert Hamoen, Jörg Stülke
Connecting parts with processes: SubtiWiki and SubtiPathways integrate gene and pathway annotation for Bacillus subtilis.
Microbiology (Reading): 2010, 156(Pt 3);849-859
[PubMed:19959575]
[WorldCat.org]
[DOI]
(I p)
