Difference between revisions of "LipC"

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* '''Operon:'''  
 
* '''Operon:'''  
 +
** ''[[ycsF]]-[[ycsG]]-[[ycsI]]-[[kipI]]-[[kipA]]-[[kipR]]-[[ycsK]]'' {{PubMed|9334321}}
 +
** ''lipC'' (according to [http://dbtbs.hgc.jp/COG/prom/ycsFGI-kipIAR-ycsK.html DBTBS])
  
* '''[[Sigma factor]]:''' [[SigK]] {{PubMed|15699190,17220230}}
+
* '''[[Sigma factor]]:'''  
 +
** ''lipC'': [[SigK]] {{PubMed|15699190,17220230}}
  
* '''Regulation:''' expressed four hours after onset of sporulation ([[GerE]]) [http://www.ncbi.nlm.nih.gov/sites/entrez/17220230 PubMed]
+
* '''Regulation:'''  
 +
** expressed four hours after onset of sporulation ([[GerE]]) [http://www.ncbi.nlm.nih.gov/sites/entrez/17220230 PubMed]
  
* '''Regulatory mechanism:''' [[GerE]]: transcription activation [http://www.ncbi.nlm.nih.gov/sites/entrez/17220230 PubMed]
+
* '''Regulatory mechanism:'''  
 +
** [[GerE]]: transcription activation [http://www.ncbi.nlm.nih.gov/sites/entrez/17220230 PubMed]
 
   
 
   
 
* '''Additional information:'''  
 
* '''Additional information:'''  
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=References=
 
=References=
<pubmed> 17220230 </pubmed>
+
<pubmed> 17220230 9334321</pubmed>
  
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 19:08, 20 August 2009

  • Description: lipase implicated in spore germination

Gene name lipC
Synonyms ycsK
Essential no
Product lipase
Function spore germination
MW, pI 23 kDa, 5.839
Gene length, protein length 639 bp, 213 aa
Immediate neighbours kipR, yczI
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YcsK context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Locus tag: BSU04110

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: 'GDSL' lipolytic enzyme family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization: spore wall (according to Swiss-Prot), mother cell PubMed

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • expressed four hours after onset of sporulation (GerE) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Atsushi Masayama, Ritsuko Kuwana, Hiromu Takamatsu, Hisashi Hemmi, Tohru Yoshimura, Kazuhito Watabe, Ryuichi Moriyama
A novel lipolytic enzyme, YcsK (LipC), located in the spore coat of Bacillus subtilis, is involved in spore germination.
J Bacteriol: 2007, 189(6);2369-75
[PubMed:17220230] [WorldCat.org] [DOI] (P p)

L Wang, R Grau, M Perego, J A Hoch
A novel histidine kinase inhibitor regulating development in Bacillus subtilis.
Genes Dev: 1997, 11(19);2569-79
[PubMed:9334321] [WorldCat.org] [DOI] (P p)