Difference between revisions of "Kre"

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|style="background:#ABCDEF;" align="center"|'''Function''' || control of [[ComK]] accumulation and of bistable competence gene expression
 
|style="background:#ABCDEF;" align="center"|'''Function''' || control of [[ComK]] accumulation and of bistable competence gene expression
 
|-
 
|-
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU14020 ykyB]
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU14020 kre]
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 17 kDa, 10.172   
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 17 kDa, 10.172   
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=== Additional information===
 
=== Additional information===
 
 
 
  
 
=The protein=
 
=The protein=
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=Expression and regulation=
 
=Expression and regulation=
  
* '''Operon:''' [[ykyB]] {{PubMed|8169223}}
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* '''Operon:''' [[kre]] {{PubMed|8169223}}
  
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ykyB_1474560_1475024_-1 ykyB] {{PubMed|22383849}}
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ykyB_1474560_1475024_-1 kre] {{PubMed|22383849}}
  
 
* '''[[Sigma factor]]:'''  
 
* '''[[Sigma factor]]:'''  

Revision as of 14:50, 8 May 2015

  • Description: ComK repressor, affects the stability of the comK mRNA

Gene name ykyB
Synonyms
Essential no
Product unknown
Function control of ComK accumulation and of bistable competence gene expression
Gene expression levels in SubtiExpress: kre
MW, pI 17 kDa, 10.172
Gene length, protein length 462 bp, 154 aa
Immediate neighbours cheV, ykuC
Sequences Protein DNA DNA_with_flanks
Genetic context
YkyB context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YkyB expression.png















Categories containing this gene/protein

genetic competence

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU14020

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References