Difference between revisions of "KdgT"

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* '''Operon:''' ''[[kdgR]]-[[kdgK]]-[[kdgA]]-[[kdgT]]'' {{PubMed|9846747}}
 
* '''Operon:''' ''[[kdgR]]-[[kdgK]]-[[kdgA]]-[[kdgT]]'' {{PubMed|9846747}}
  
* '''[[Sigma factor]]:''' [[SigA]] {{PubMed|9846747}}
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=kdgT_2321972_2322964_-1 kdgT] {{PubMed|22383849}}
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* '''Sigma factor:''' [[SigA]] {{PubMed|9846747}}
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  
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** [[CcpA]]: transcription repression {{PubMed|9846747}}
 
** [[CcpA]]: transcription repression {{PubMed|9846747}}
  
* '''Additional information:'''  
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* '''Additional information:'''
  
 
=Biological materials =
 
=Biological materials =

Revision as of 08:42, 16 April 2012

  • Description: 2-keto-3-deoxygluconate permease

Gene name kdgT
Synonyms
Essential no
Product 2-keto-3-deoxygluconate permease
Function utilization of galacturonic acid
MW, pI 34 kDa, 8.935
Gene length, protein length 990 bp, 330 aa
Immediate neighbours ypwA, kdgA
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
KdgT context.gif
This image was kindly provided by SubtiList



Categories containing this gene/protein

transporters/ other, utilization of specific carbon sources

This gene is a member of the following regulons

CcpA regulon, KdgR regulon

The gene

Basic information

  • Locus tag: BSU22090

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: sigma-70 factor family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Petar Pujic, Rozenn Dervyn, Alexei Sorokin, S Dusko Ehrlich
The kdgRKAT operon of Bacillus subtilis: detection of the transcript and regulation by the kdgR and ccpA genes.
Microbiology (Reading): 1998, 144 ( Pt 11);3111-3118
[PubMed:9846747] [WorldCat.org] [DOI] (P p)