Difference between revisions of "IspH"
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|style="background:#ABCDEF;" align="center"|'''Function''' || unknown | |style="background:#ABCDEF;" align="center"|'''Function''' || unknown | ||
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| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU25160 ispH] |
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 34 kDa, 5.615 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 34 kDa, 5.615 | ||
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yqfQ]]'', ''[[yqfO]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yqfQ]]'', ''[[yqfO]]'' | ||
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| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU25160 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU25160 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU25160 Advanced_DNA] |
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Revision as of 14:19, 13 May 2013
- Description: similar to penicillin tolerance, isopentenyl diphosphate biosynthesis
| Gene name | ispH |
| Synonyms | yqfP |
| Essential | yes PubMed |
| Product | unknown |
| Function | unknown |
| Gene expression levels in SubtiExpress: ispH | |
| MW, pI | 34 kDa, 5.615 |
| Gene length, protein length | 942 bp, 314 aa |
| Immediate neighbours | yqfQ, yqfO |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
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Expression at a glance PubMed
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Contents
Categories containing this gene/protein
biosynthesis of lipids, essential genes
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU25160
Phenotypes of a mutant
essential PubMed
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: Isopentenyl diphosphate + NAD(P)+ + H2O = (E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate + NAD(P)H (according to Swiss-Prot)
- Protein family: ispH family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: P54473
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Sigma factor:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Mattijs K Julsing, Michael Rijpkema, Herman J Woerdenbag, Wim J Quax, Oliver Kayser
Functional analysis of genes involved in the biosynthesis of isoprene in Bacillus subtilis.
Appl Microbiol Biotechnol: 2007, 75(6);1377-84
[PubMed:17458547]
[WorldCat.org]
[DOI]
(P p)
