Difference between revisions of "IspA"

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= Categories containing this gene/protein =
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{{SubtiWiki category|[[biosynthesis of lipids]]}}
 
=The protein=
 
=The protein=
  

Revision as of 17:28, 30 November 2010

  • Description: geranyltransferase

Gene name ispA
Synonyms
Essential no
Product geranyltransferase
Function biosynthesis of isoprenoids
MW, pI 33 kDa, 4.522
Gene length, protein length 957 bp, 319 aa
Immediate neighbours metE, rsbRB
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
IspA context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Locus tag: BSU13190

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

Categories containing this gene/protein

biosynthesis of lipids

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: Geranyl diphosphate + isopentenyl diphosphate = diphosphate + trans,trans-farnesyl diphosphate (according to Swiss-Prot)
  • Protein family: FPP/GGPP synthetase family (according to Swiss-Prot) peptidase S8 family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization: cytoplasm (according to Swiss-Prot)

Database entries

  • Structure:
  • KEGG entry: [3]

Additional information

Expression and regulation

  • Operon: ispA (according to DBTBS)
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Mattijs K Julsing, Michael Rijpkema, Herman J Woerdenbag, Wim J Quax, Oliver Kayser
Functional analysis of genes involved in the biosynthesis of isoprene in Bacillus subtilis.
Appl Microbiol Biotechnol: 2007, 75(6);1377-84
[PubMed:17458547] [WorldCat.org] [DOI] (P p)

Y Koide, A Nakamura, T Uozumi, T Beppu
Cloning and sequencing of the major intracellular serine protease gene of Bacillus subtilis.
J Bacteriol: 1986, 167(1);110-6
[PubMed:3087947] [WorldCat.org] [DOI] (P p)