Difference between revisions of "HxlB"

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(Expression and regulation)
(Expression and regulation)
Line 88: Line 88:
 
=Expression and regulation=
 
=Expression and regulation=
  
* '''Operon:'''  ''[[hlxA]]-[[hxlB]]''
+
* '''Operon:'''  ''[[hxlA]]-[[hxlB]]''
  
 
* '''Sigma factor:'''  
 
* '''Sigma factor:'''  
  
* '''Regulation:'''  
+
* '''Regulation:''' induction by formaldehyde ([[HxlR]])
  
 
* '''Regulatory mechanism:''' transcription activation by [[HxlR]]
 
* '''Regulatory mechanism:''' transcription activation by [[HxlR]]

Revision as of 13:46, 18 March 2009

  • Description: write here

Gene name hxlB
Synonyms yckF
Essential no
Product 6-phospho-3-hexuloisomerase (PHI)
Function possible detoxification system for formaldehyde
MW, pI 19 kDa, 5.791
Gene length, protein length 555 bp, 185 aa
Immediate neighbours tlpC, hxlA
Gene sequence (+200bp) Protein sequence
Genetic context
HxlB context.gif



The gene

Basic information

  • Coordinates:

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • Swiss prot entry:
  • KEGG entry:
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation: induction by formaldehyde (HxlR)
  • Regulatory mechanism: transcription activation by HxlR
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

  1. Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed