Difference between revisions of "HisF"

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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[hisI]]'', ''[[hisA]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[hisI]]'', ''[[hisA]]''
 
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU34870 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU34870 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU34870 Advanced_DNA]
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU34870 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU34870 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU34870 DNA_with_flanks]
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:hisF_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:hisF_context.gif]]

Revision as of 11:22, 14 May 2013

  • Description: cyclase-like protein

Gene name hisF
Synonyms
Essential no
Product cyclase-like protein
Function biosynthesis of histidine
Gene expression levels in SubtiExpress: hisF
Metabolic function and regulation of this protein in SubtiPathways:
His
MW, pI 27 kDa, 5.238
Gene length, protein length 756 bp, 252 aa
Immediate neighbours hisI, hisA
Sequences Protein DNA DNA_with_flanks
Genetic context
HisF context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
HisF expression.png




























Categories containing this gene/protein

biosynthesis/ acquisition of amino acids

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU34870

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]-1-(5-phosphoribosyl)imidazole-4-carboxamide + L-glutamine = imidazole-glycerol phosphate + 5-aminoimidazol-4-carboxamide ribonucleotide + L-glutamate + H2O (according to Swiss-Prot)
  • Protein family: hisA/hisF family (according to Swiss-Prot)
  • Paralogous protein(s): HisA

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation: repressed by casamino acids PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Ulrike Mäder, Georg Homuth, Christian Scharf, Knut Büttner, Rüdiger Bode, Michael Hecker
Transcriptome and proteome analysis of Bacillus subtilis gene expression modulated by amino acid availability.
J Bacteriol: 2002, 184(15);4288-95
[PubMed:12107147] [WorldCat.org] [DOI] (P p)