Difference between revisions of "HepS"

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* '''Additional information:'''
 
* '''Additional information:'''
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** number of protein molecules per cell (minimal medium with glucose and ammonium): 358 {{PubMed|24696501}}
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** number of protein molecules per cell (complex medium with amino acids, without glucose): 958 {{PubMed|24696501}}
  
 
=Biological materials =
 
=Biological materials =

Revision as of 10:40, 17 April 2014

  • Description: heptaprenyl diphosphate synthase component I

Gene name hepS
Synonyms gerCA, hepA
Essential yes PubMed
Product heptaprenyl diphosphate synthase component I
Function menaquinone biosynthesis
Gene expression levels in SubtiExpress: hepS
MW, pI 28 kDa, 6.273
Gene length, protein length 753 bp, 251 aa
Immediate neighbours menH, mtrB
Sequences Protein DNA DNA_with_flanks
Genetic context
HepS context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
HepS expression.png
























Categories containing this gene/protein

biosynthesis of cofactors, essential genes

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU22760

Phenotypes of a mutant

essential PubMed

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: All-trans-hexaprenyl diphosphate + isopentenyl diphosphate = diphosphate + all-trans-heptaprenyl diphosphate (according to Swiss-Prot)
  • Protein family: Methylisocitrate lyase family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:
    • number of protein molecules per cell (minimal medium with glucose and ammonium): 358 PubMed
    • number of protein molecules per cell (complex medium with amino acids, without glucose): 958 PubMed

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Becky M Hess, Junfeng Xue, Lye Meng Markillie, Ronald C Taylor, H Steven Wiley, Birgitte K Ahring, Bryan Linggi
Coregulation of Terpenoid Pathway Genes and Prediction of Isoprene Production in Bacillus subtilis Using Transcriptomics.
PLoS One: 2013, 8(6);e66104
[PubMed:23840410] [WorldCat.org] [DOI] (I e)