Difference between revisions of "HepS"
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|style="background:#ABCDEF;" align="center"|'''Function''' || menaquinone biosynthesis | |style="background:#ABCDEF;" align="center"|'''Function''' || menaquinone biosynthesis | ||
|- | |- | ||
| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU22760 hepS] |
|- | |- | ||
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 28 kDa, 6.273 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 28 kDa, 6.273 | ||
| Line 22: | Line 22: | ||
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[menH]]'', ''[[mtrB]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[menH]]'', ''[[mtrB]]'' | ||
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| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU22760 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU22760 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU22760 Advanced_DNA] |
|- | |- | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:hepS_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:hepS_context.gif]] | ||
Revision as of 14:09, 13 May 2013
- Description: heptaprenyl diphosphate synthase component I
| Gene name | hepS |
| Synonyms | gerCA, hepA |
| Essential | yes PubMed |
| Product | heptaprenyl diphosphate synthase component I |
| Function | menaquinone biosynthesis |
| Gene expression levels in SubtiExpress: hepS | |
| MW, pI | 28 kDa, 6.273 |
| Gene length, protein length | 753 bp, 251 aa |
| Immediate neighbours | menH, mtrB |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
biosynthesis of cofactors, essential genes
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU22760
Phenotypes of a mutant
essential PubMed
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: All-trans-hexaprenyl diphosphate + isopentenyl diphosphate = diphosphate + all-trans-heptaprenyl diphosphate (according to Swiss-Prot)
- Protein family: Methylisocitrate lyase family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: P31112
- KEGG entry: [2]
- E.C. number: 2.5.1.30
Additional information
Expression and regulation
- Operon:
- Sigma factor:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
