Difference between revisions of "HemN"

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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[hrcA]]'', ''[[lepA]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[hrcA]]'', ''[[lepA]]''
 
|-
 
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|style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/hemN_nucleotide.txt    Gene sequence      (+200bp)  ]'''
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|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB14492&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
|style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/hemN_protein.txt Protein sequence]'''
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|-
 
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|colspan="2" style="background:#FAF8CC;color:#FF0000" align="center" | '''Caution: The sequence for this gene in SubtiList contains errors
 
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:hemN_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:hemN_context.gif]]

Revision as of 23:27, 16 April 2009

  • Description: anaerobic coproporphyrinogen III oxidase

Gene name hemN
Synonyms yqeR
Essential no
Product anaerobic coproporphyrinogen III oxidase
Function heme biosynthesis
MW, pI 41 kDa, 5.534
Gene length, protein length 1098 bp, 366 aa
Immediate neighbours hrcA, lepA
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
HemN context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Coordinates:

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • Swiss prot entry:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
  • Regulatory mechanism:
  • Additional information: There is a terminator between lepA and hemN with only little readthrough

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

  1. Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed