Difference between revisions of "GsiB"

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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ydbA]]'', ''[[ydbB]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ydbA]]'', ''[[ydbB]]''
 
|-
 
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU04400 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU04400 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU04400 Advanced_DNA]
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU04400 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU04400 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU04400 DNA_with_flanks]
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:gsiB_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:gsiB_context.gif]]

Revision as of 09:30, 14 May 2013

  • Description: general stress protein

Gene name gsiB
Synonyms
Essential no
Product general stress protein
Function unknown
Gene expression levels in SubtiExpress: gsiB
MW, pI 13 kDa, 5.145
Gene length, protein length 369 bp, 123 aa
Immediate neighbours ydbA, ydbB
Sequences Protein DNA DNA_with_flanks
Genetic context
GsiB context.gif
This image was kindly provided by SubtiList
[None Expression at a glance]   PubMed
GsiB expression.png
























Categories containing this gene/protein

general stress proteins (controlled by SigB)

This gene is a member of the following regulons

SigB regulon, SigI regulon

The gene

Basic information

  • Locus tag: BSU04400

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulatory mechanism:
  • Additional information: the mRNA is very stable (half-life > 15 min) PubMed

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Additional publications: PubMed

G Hambraeus, C von Wachenfeldt, L Hederstedt
Genome-wide survey of mRNA half-lives in Bacillus subtilis identifies extremely stable mRNAs.
Mol Genet Genomics: 2003, 269(5);706-14
[PubMed:12884008] [WorldCat.org] [DOI] (P p)

A Petersohn, M Brigulla, S Haas, J D Hoheisel, U Völker, M Hecker
Global analysis of the general stress response of Bacillus subtilis.
J Bacteriol: 2001, 183(19);5617-31
[PubMed:11544224] [WorldCat.org] [DOI] (P p)

B Jürgen, T Schweder, M Hecker
The stability of mRNA from the gsiB gene of Bacillus subtilis is dependent on the presence of a strong ribosome binding site.
Mol Gen Genet: 1998, 258(5);538-45
[PubMed:9669336] [WorldCat.org] [DOI] (P p)

B Maul, U Völker, S Riethdorf, S Engelmann, M Hecker
sigma B-dependent regulation of gsiB in response to multiple stimuli in Bacillus subtilis.
Mol Gen Genet: 1995, 248(1);114-20
[PubMed:7651322] [WorldCat.org] [DOI] (P p)

J P Mueller, G Bukusoglu, A L Sonenshein
Transcriptional regulation of Bacillus subtilis glucose starvation-inducible genes: control of gsiA by the ComP-ComA signal transduction system.
J Bacteriol: 1992, 174(13);4361-73
[PubMed:1378051] [WorldCat.org] [DOI] (P p)