Difference between revisions of "GpsA"

From SubtiWiki
Jump to: navigation, search
Line 57: Line 57:
  
 
=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU22830&redirect=T BSU22830]
  
 
* '''DBTBS entry:''' no entry
 
* '''DBTBS entry:''' no entry
Line 95: Line 96:
  
 
=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU22830&redirect=T BSU22830]
  
 
* '''Structure:''' [http://www.rcsb.org/pdb/explore/explore.do?pdbId=3K96 3K96] (from ''Coxiella burnetii RSA 493'', 37% identity, 59% similarity)
 
* '''Structure:''' [http://www.rcsb.org/pdb/explore/explore.do?pdbId=3K96 3K96] (from ''Coxiella burnetii RSA 493'', 37% identity, 59% similarity)

Revision as of 14:04, 2 April 2014

  • Description: glycerol-3-phosphate dehydrogenase (NAD)

Gene name gpsA
Synonyms
Essential yes PubMed
Product glycerol-3-phosphate dehydrogenase (NAD)
Function biosynthesis of phospholipids
Gene expression levels in SubtiExpress: gpsA
Metabolic function and regulation of this protein in SubtiPathways:
gpsA
MW, pI 37 kDa, 6.231
Gene length, protein length 1035 bp, 345 aa
Immediate neighbours yphE, engA
Sequences Protein DNA DNA_with_flanks
Genetic context
GpsA context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
GpsA expression.png
















Categories containing this gene/protein

biosynthesis of lipids, essential genes,

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU22830

Phenotypes of a mutant

essential PubMed

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: sn-glycerol 3-phosphate + NAD(P)+ = glycerone phosphate + NAD(P)H (according to Swiss-Prot)
  • Protein family: NAD-dependent glycerol-3-phosphate dehydrogenase family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure: 3K96 (from Coxiella burnetii RSA 493, 37% identity, 59% similarity)
  • KEGG entry: [2]

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References