Difference between revisions of "GltR"

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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yrdN]]'', ''[[yrdK]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yrdN]]'', ''[[yrdK]]''
 
|-
 
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|style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/gltR_nucleotide.txt    Gene sequence      (+200bp)  ]'''
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|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB14608&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
|style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/gltR_protein.txt Protein sequence]'''
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|-
 
|-
 
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|colspan="2" style="background:#FAF8CC;color:#FF0000" align="center" | '''Caution: The sequence for this gene in SubtiList contains errors
 
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:gltR_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:gltR_context.gif]]

Revision as of 23:25, 16 April 2009

  • Description: transcriptional regulator

Gene name gltR
Synonyms yrdL
Essential no
Product transcriptional regulator
Function unknownunknown
MW, pI 32 kDa, 6.653
Gene length, protein length 888 bp, 296 aa
Immediate neighbours yrdN, yrdK
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
GltR context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Coordinates:

Phenotypes of a mutant

The function of this protein is unknown. However, certain mutant forms are able to activate expression of the gltA-gltB operon (and thus to replace the cognate activator protein GltC)

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: LysR family of transcription factors
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • Swiss prot entry:
  • KEGG entry: [3]
  • E.C. number:

Additional information

The function of this protein is unknown. However, certain mutant forms are able to activate expression of the gltA-gltB operon (and thus to replace the cognate activator protein GltC)

Expression and regulation

  • Operon:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Linc Sonenshein, Tufts University, Boston, MA, USA Homepage

Your additional remarks

References

  1. Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed