Difference between revisions of "GltC"

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(Extended information on the protein)
(Database entries)
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== Database entries ==
 
== Database entries ==
  
* '''Structure'''
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* '''Structure:'''
  
* '''Swiss prot entry'''
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* '''Swiss prot entry:'''
  
* '''KEGG entry'''
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* '''KEGG entry:'''
  
 
=Expression and regulation=
 
=Expression and regulation=

Revision as of 16:53, 12 December 2008

  • Synonyms:
  • Description: Transcriptional activator of the gltAB operon. Activates expression of the operon in the absence of arginine.


The gene

Basic information

  • Coordinates:
  • Gene length:

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry:[2]

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: transcription activation of the gltAB operon
  • Protein family: LysR-type transcription regulator
  • Paralogous protein(s): none, but there are 19 members of the LysR family in B. subtilis

Extended information on the protein

  • Kinetic information:
  • Domains: DNA-binding helix-turn-helix motif: AA 18 ... 37
  • Modification:
  • Effectors of protein activity: 2-oxoglutarate
  • Interactions:
    • GltC-RocG, This interaction takes place in the presence of glutamate. It prevents the transcription activation of the gltAB operon. Note that RocG expression is strongly regulated. <ref>Commichau et al. (2007)</ref>
  • Localization:

Database entries

  • Structure:
  • Swiss prot entry:
  • KEGG entry:

Expression and regulation

  • Operon: gltC
  • Sigma factor: SigA
  • Regulation: autoregulation by GltC
  • Regulatory mechanism: autorepression

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • Antibody: available in Stülke lab


Labs working on this gene/protein

Linc Sonenshein, Tufts University, Boston, MA, USA [3]

Jörg Stülke, University of Göttingen, Germany [4]

Your additional remarks

References

  1. Author1, Author2 & Author3 (year) Title Journal volume: page-page. [5]