Difference between revisions of "GltC"
(→Additional remarks) |
|||
| Line 2: | Line 2: | ||
* '''Description:''' Transcriptional activator of the ''gltAB'' operon. Activates expression of the operon in the absence of arginine. | * '''Description:''' Transcriptional activator of the ''gltAB'' operon. Activates expression of the operon in the absence of arginine. | ||
| + | |||
=The gene= | =The gene= | ||
| Line 10: | Line 11: | ||
* '''Gene length:''' | * '''Gene length:''' | ||
| + | |||
| + | ==Phenotypes of a mutant == | ||
== Database entries == | == Database entries == | ||
| Line 15: | Line 18: | ||
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/gltC.html] | * '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/gltC.html] | ||
| − | * '''SubtiList entry:''' [http://genolist.pasteur.fr/SubtiList/genome.cgi?gene_detail+BG10810] | + | * '''SubtiList entry:'''[http://genolist.pasteur.fr/SubtiList/genome.cgi?gene_detail+BG10810] |
=The protein= | =The protein= | ||
| Line 26: | Line 29: | ||
* '''Paralogous protein(s):''' none, but there are 19 members of the LysR family in ''B. subtilis'' | * '''Paralogous protein(s):''' none, but there are 19 members of the LysR family in ''B. subtilis'' | ||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
== Extended information on the protein == | == Extended information on the protein == | ||
| Line 50: | Line 45: | ||
* '''Localization''' | * '''Localization''' | ||
| − | =Expression and | + | == Database entries == |
| + | |||
| + | * '''Structure''' | ||
| + | |||
| + | * '''Swiss prot entry''' | ||
| + | |||
| + | * '''KEGG entry''' | ||
| + | |||
| + | =Expression and regulation= | ||
* '''Operon:''' ''gltC'' [http://dbtbs.hgc.jp/COG/prom/gltC.html] | * '''Operon:''' ''gltC'' [http://dbtbs.hgc.jp/COG/prom/gltC.html] | ||
| Line 60: | Line 63: | ||
* '''Regulatory mechanism:''' autorepression | * '''Regulatory mechanism:''' autorepression | ||
| − | =Biological | + | =Biological materials = |
* '''Mutant:''' | * '''Mutant:''' | ||
| Line 72: | Line 75: | ||
* '''Antibody:''' available in Stülke lab | * '''Antibody:''' available in Stülke lab | ||
| − | |||
| − | + | =Labs working on this gene/protein= | |
| − | = | ||
| − | |||
| − | |||
Linc Sonenshein, Tufts University, Boston, MA, USA [http://www.tufts.edu/sackler/microbiology/faculty/sonenshein/index.html] | Linc Sonenshein, Tufts University, Boston, MA, USA [http://www.tufts.edu/sackler/microbiology/faculty/sonenshein/index.html] | ||
| Line 83: | Line 82: | ||
[[Stülke|Jörg Stülke]], University of Göttingen, Germany | [[Stülke|Jörg Stülke]], University of Göttingen, Germany | ||
[http://wwwuser.gwdg.de/~genmibio/stuelke.html] | [http://wwwuser.gwdg.de/~genmibio/stuelke.html] | ||
| + | |||
| + | =Your additional remarks= | ||
=References= | =References= | ||
| + | |||
| + | # Author1, Author2 & Author3 (year) Title ''Journal'' '''volume:''' page-page. [http://www.ncbi.nlm.nih.gov/sites/entrez/PMID] | ||
Revision as of 16:20, 12 December 2008
- Synonyms:
- Description: Transcriptional activator of the gltAB operon. Activates expression of the operon in the absence of arginine.
Contents
The gene
Basic information
- Coordinates:
- Gene length:
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry:[2]
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: transcription activation of the gltAB operon
- Protein family: LysR-type transcription regulator
- Paralogous protein(s): none, but there are 19 members of the LysR family in B. subtilis
Extended information on the protein
- Kinetic information
- Domains DNA-binding helix-turn-helix motif: AA 18 ... 37
- Modification
- Effectors of protein activity:2-oxoglutarate
- Interactions:
- Localization
Database entries
- Structure
- Swiss prot entry
- KEGG entry
Expression and regulation
- Operon: gltC [3]
- Sigma factor: SigA [4]
- Regulation: autoregulation by GltC [5]
- Regulatory mechanism: autorepression
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- Antibody: available in Stülke lab
Labs working on this gene/protein
Linc Sonenshein, Tufts University, Boston, MA, USA [6]
Jörg Stülke, University of Göttingen, Germany [7]
Your additional remarks
References
- Author1, Author2 & Author3 (year) Title Journal volume: page-page. [8]
