Difference between revisions of "GerPD"

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* '''Operon:''' ''[[gerPA]]-[[gerPB]]-[[gerPC]]-[[gerPD]]-[[gerPE]]-[[gerPF]]'' (according to [http://dbtbs.hgc.jp/COG/prom/gerPABCDEF.html DBTBS])
 
* '''Operon:''' ''[[gerPA]]-[[gerPB]]-[[gerPC]]-[[gerPD]]-[[gerPE]]-[[gerPF]]'' (according to [http://dbtbs.hgc.jp/COG/prom/gerPABCDEF.html DBTBS])
  
* '''[[Sigma factor]]:''' [[SigK]] {{PubMed|15699190}}
+
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=gerPD_1149145_1149321_-1 gerPD] {{PubMed|22383849}}
 +
 
 +
* '''Sigma factor:''' [[SigK]] {{PubMed|15699190}}
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  

Revision as of 17:26, 12 April 2012

  • Description: probable spore germination protein

Gene name gerPD
Synonyms yisE
Essential no
Product unknown
Function germination
MW, pI 6 kDa, 3.975
Gene length, protein length 174 bp, 58 aa
Immediate neighbours gerPE, gerPC
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
GerPD context.gif
This image was kindly provided by SubtiList



Categories containing this gene/protein

germination

This gene is a member of the following regulons

SigK regulon

The gene

Basic information

  • Locus tag: BSU10690

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • expressed during sporulation in the mother cell (SigK) PubMed
    • subject to negative regulation by GerE PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

J Behravan, H Chirakkal, A Masson, A Moir
Mutations in the gerP locus of Bacillus subtilis and Bacillus cereus affect access of germinants to their targets in spores.
J Bacteriol: 2000, 182(7);1987-94
[PubMed:10715007] [WorldCat.org] [DOI] (P p)