Difference between revisions of "FliF"
| Line 15: | Line 15: | ||
|- | |- | ||
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU16210 fliF] | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU16210 fliF] | ||
| + | |- | ||
| + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://subtiwiki.uni-goettingen.de/interact/ ''Subt''Interact]''': [http://subtiwiki.uni-goettingen.de/interact/index.php?protein=FliF FliF] | ||
|- | |- | ||
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 59 kDa, 4.37 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 59 kDa, 4.37 | ||
| Line 54: | Line 56: | ||
===Phenotypes of a mutant === | ===Phenotypes of a mutant === | ||
* mucoid phenotype due to the overproduction of poly-gamma-glutamate {{PubMed|24296669}} | * mucoid phenotype due to the overproduction of poly-gamma-glutamate {{PubMed|24296669}} | ||
| + | * no secretion of [[FlgM]], permanent inhibition of [[SigD]] {{PubMed|25313396}} | ||
=== Database entries === | === Database entries === | ||
| Line 63: | Line 66: | ||
=== Additional information=== | === Additional information=== | ||
| − | |||
| − | |||
| Line 91: | Line 92: | ||
* '''[[SubtInteract|Interactions]]:''' | * '''[[SubtInteract|Interactions]]:''' | ||
| + | ** [[FliF]]-[[FliG]] {{PubMed|25313396}} | ||
| − | * '''[[Localization]]:''' cell membrane [http://www.ncbi.nlm.nih.gov/pubmed/18763711 PubMed] | + | * '''[[Localization]]:''' |
| + | ** cell membrane [http://www.ncbi.nlm.nih.gov/pubmed/18763711 PubMed] | ||
=== Database entries === | === Database entries === | ||
| Line 147: | Line 150: | ||
=References= | =References= | ||
| − | <pubmed>1905667,17850253,14651647,18763711, 9657996,8157612,15175317 23190039 24296669</pubmed> | + | <pubmed>1905667,17850253,14651647,18763711, 9657996,8157612,15175317 23190039 24296669 25313396</pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 17:01, 27 October 2014
- Description: flagellar basal-body M-ring protein, membrane anchor of the basal body
| Gene name | fliF |
| Synonyms | |
| Essential | no |
| Product | flagellar basal-body M-ring protein |
| Function | movement and chemotaxis |
| Gene expression levels in SubtiExpress: fliF | |
| Interactions involving this protein in SubtInteract: FliF | |
| MW, pI | 59 kDa, 4.37 |
| Gene length, protein length | 1608 bp, 536 aa |
| Immediate neighbours | fliE, fliG |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
motility and chemotaxis, membrane proteins
This gene is a member of the following regulons
CodY regulon, SigD regulon, Spo0A regulon
The gene
Basic information
- Locus tag: BSU16210
Phenotypes of a mutant
- mucoid phenotype due to the overproduction of poly-gamma-glutamate PubMed
- no secretion of FlgM, permanent inhibition of SigD PubMed
Database entries
- BsubCyc: BSU16210
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Protein family: fliF family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Modification:
- Effectors of protein activity:
- Localization:
- cell membrane PubMed
Database entries
- BsubCyc: BSU16210
- Structure:
- UniProt: P23447
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon: flgB-flgC-fliE-fliF-fliG-fliH-fliI-fliJ-ylxF-fliK-flgD-flgE-fliL-fliM-fliY-cheY-fliZ-fliP-fliQ-fliR-flhB-flhA-flhF-flhG-cheB-cheA-cheW-cheC-cheD-sigD-swrB PubMed
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
