Difference between revisions of "Essential genes"

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(→‎Genes in this functional category)
(→‎Genes in this functional category)
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== Genes in this functional category ==
 
== Genes in this functional category ==
 +
 +
=== Aminoacyl-tRNA synthetases ===
 +
* ''[[alaS]]''
 +
* ''[[argS]]''
 +
* ''[[asnS]]''
 +
* ''[[aspS]]''
 +
* ''[[cysS]]''
 +
* ''[[gatA]]''
 +
* ''[[gatB]]''
 +
* ''[[gatC]]''
 +
* ''[[gltX]]''
 +
* ''[[glyS]]''
 +
* ''[[hisS]]''
 +
* ''[[ileS]]''
 +
* ''[[leuS]]''
 +
* ''[[lysS]]''
 +
* ''[[metS]]''
 +
* ''[[pheS]]''
 +
* ''[[pheT]]''
 +
* ''[[proS]]''
 +
* ''[[serS]]''
 +
* ''[[trpS]]''
 +
* ''[[tyrS]]''
 +
* ''[[valS]]''
 +
 +
 +
=== Ribosomal proteins ===
 +
* ''[[rplB]]''
 +
* ''[[rplC]]''
 +
* ''[[rplD]]''
 +
* ''[[rplE]]''
 +
* ''[[rplF]]''
 +
* ''[[rplJ]]''
 +
* ''[[rplL]]''
 +
* ''[[rplM]]''
 +
* ''[[rplN]]''
 +
* ''[[rplP]]''
 +
* ''[[rplQ]]''
 +
* ''[[rplR]]''
 +
* ''[[rplS]]''
 +
* ''[[rplT]]''
 +
* ''[[rplU]]''
 +
* ''[[rplX]]''
 +
* ''[[rpmA]]''
 +
* ''[[rpmD]]''
 +
* ''[[rpsB]]''
 +
* ''[[rpsC]]''
 +
* ''[[rpsD]]''
 +
* ''[[rpsE]]''
 +
* ''[[rpsG]]''
 +
* ''[[rpsH]]''
 +
* ''[[rpsI]]''
 +
* ''[[rpsJ]]''
 +
* ''[[rpsK]]''
 +
* ''[[rpsL]]''
 +
* ''[[rpsM]]''
 +
* ''[[rpsN]]''
 +
* ''[[rpsO]]''
 +
* ''[[rpsP]]''
 +
* ''[[rpsQ]]''
 +
* ''[[rpsR]]''
 +
* ''[[rpsS]]''
 +
 +
=== Translation/ other ===
 +
* ''[[fusA]]''
 +
* ''[[infA]]''
 +
* ''[[infB]]''
 +
* ''[[infC]]''
 +
* ''[[map]]''
 +
* ''[[tilS]]''
 +
* ''[[tsf]]''
 +
* ''[[tufA]]''
 +
 +
=== DNA replication ===
 +
* ''[[dnaA]]''
 +
* ''[[dnaB]]''
 +
* ''[[dnaC]]''
 +
* ''[[dnaD]]''
 +
* ''[[dnaE]]''
 +
* ''[[dnaG]]''
 +
* ''[[dnaI]]''
 +
* ''[[dnaN]]''
 +
* ''[[dnaX]]''
 +
* ''[[ligA]]''
 +
* ''[[pcrA]]''
 +
* ''[[polC]]''
 +
* ''[[ssbA]]''
 +
 +
 +
=== Transcription ===
 +
* ''[[nusA]]''
 +
* ''[[rpoA]]''
 +
* ''[[rpoB]]''
 +
* ''[[rpoC]]''
 +
* ''[[sigA]]''
 +
 +
=== RNases ===
 +
* ''[[rnc]]''
 +
* ''[[rnjA]]''
 +
* ''[[rnpA]]''
 +
* ''[[rny]]''
 +
* ''[[rnz]]''
 +
 +
=== Other ===
 
* ''[[accA]]''
 
* ''[[accA]]''
 
* ''[[accB]]''
 
* ''[[accB]]''
−
* ''[[accC]]''
+
* ''[[accC]]''  
 
* ''[[accD]]''
 
* ''[[accD]]''
 
* ''[[acpA]]''
 
* ''[[acpA]]''
 
* ''[[acpS]]''
 
* ''[[acpS]]''
 
* ''[[adk]]''
 
* ''[[adk]]''
−
* ''[[alaS]]''
 
 
* ''[[alr]]''
 
* ''[[alr]]''
−
* ''[[argS]]''
 
 
* ''[[asd]]''
 
* ''[[asd]]''
−
* ''[[asnS]]''
 
−
* ''[[aspS]]''
 
 
* ''[[birA]]''
 
* ''[[birA]]''
 
* ''[[cca]]''
 
* ''[[cca]]''
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* ''[[cmk]]''
 
* ''[[cmk]]''
 
* ''[[cspR]]''
 
* ''[[cspR]]''
−
* ''[[cysS]]''
 
 
* ''[[dapA]]''
 
* ''[[dapA]]''
 
* ''[[dapB]]''
 
* ''[[dapB]]''
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* ''[[divIB]]''
 
* ''[[divIB]]''
 
* ''[[divIC]]''
 
* ''[[divIC]]''
−
* ''[[dnaA]]''
 
−
* ''[[dnaB]]''
 
−
* ''[[dnaC]]''
 
−
* ''[[dnaD]]''
 
−
* ''[[dnaE]]''
 
−
* ''[[dnaG]]''
 
−
* ''[[dnaI]]''
 
−
* ''[[dnaN]]''
 
−
* ''[[dnaX]]''
 
 
* ''[[dxs]]''
 
* ''[[dxs]]''
 
* ''[[era]]''
 
* ''[[era]]''
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* ''[[ftsW]]''
 
* ''[[ftsW]]''
 
* ''[[ftsZ]]''
 
* ''[[ftsZ]]''
−
* ''[[fusA]]''
 
−
* ''[[gatA]]''
 
−
* ''[[gatB]]''
 
−
* ''[[gatC]]''
 
 
* ''[[gcaD]]''
 
* ''[[gcaD]]''
 
* ''[[gcp]]''
 
* ''[[gcp]]''
 
* ''[[glmM]]''
 
* ''[[glmM]]''
 
* ''[[glmS]]''
 
* ''[[glmS]]''
−
* ''[[gltX]]''
 
 
* ''[[glyA]]''
 
* ''[[glyA]]''
 
* ''[[glyQ]]''
 
* ''[[glyQ]]''
−
* ''[[glyS]]''
 
 
* ''[[gmk]]''
 
* ''[[gmk]]''
 
* ''[[gpsA]]''
 
* ''[[gpsA]]''
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* ''[[hepS]]''
 
* ''[[hepS]]''
 
* ''[[hepT]]''
 
* ''[[hepT]]''
−
* ''[[hisS]]''
 
 
* ''[[hlpB]]''
 
* ''[[hlpB]]''
 
* ''[[holA]]''
 
* ''[[holA]]''
 
* ''[[holB]]''
 
* ''[[holB]]''
 
* ''[[hprT]]''
 
* ''[[hprT]]''
−
* ''[[ileS]]''
 
−
* ''[[infA]]''
 
−
* ''[[infB]]''
 
−
* ''[[infC]]''
 
 
* ''[[ispC]]''
 
* ''[[ispC]]''
 
* ''[[ispD]]''
 
* ''[[ispD]]''
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* ''[[ispG]]''
 
* ''[[ispG]]''
 
* ''[[ispH]]''
 
* ''[[ispH]]''
−
* ''[[leuS]]''
 
−
* ''[[ligA]]''
 
−
* ''[[lysS]]''
 
−
* ''[[map]]''
 
 
* ''[[menA]]''
 
* ''[[menA]]''
 
* ''[[menB]]''
 
* ''[[menB]]''
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* ''[[menH]]''
 
* ''[[menH]]''
 
* ''[[metK]]''
 
* ''[[metK]]''
−
* ''[[metS]]''
+
 
 
* ''[[mnaA]]''
 
* ''[[mnaA]]''
 
* ''[[mraY]]''
 
* ''[[mraY]]''
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* ''[[nrdF]]''
 
* ''[[nrdF]]''
 
* ''[[nrdI]]''
 
* ''[[nrdI]]''
−
* ''[[nusA]]''
+
 
 
* ''[[obg]]''
 
* ''[[obg]]''
 
* ''[[odhB]]''
 
* ''[[odhB]]''
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* ''[[parE]]''
 
* ''[[parE]]''
 
* ''[[pbpB]]''
 
* ''[[pbpB]]''
−
* ''[[pcrA]]''
+
 
 
* ''[[pdhA]]''
 
* ''[[pdhA]]''
 
* ''[[pgsA]]''
 
* ''[[pgsA]]''
−
* ''[[pheS]]''
+
 
−
* ''[[pheT]]''
 
 
* ''[[plsC]]''
 
* ''[[plsC]]''
 
* ''[[plsX]]''
 
* ''[[plsX]]''
 
* ''[[plsY]]''
 
* ''[[plsY]]''
 
* ''[[pncB]]''
 
* ''[[pncB]]''
−
* ''[[polC]]''
+
 
 
* ''[[ppaC]]''
 
* ''[[ppaC]]''
 
* ''[[prfA]]''
 
* ''[[prfA]]''
 
* ''[[prfB]]''
 
* ''[[prfB]]''
 
* ''[[priA]]''
 
* ''[[priA]]''
−
* ''[[proS]]''
+
 
 
* ''[[prs]]''
 
* ''[[prs]]''
 
* ''[[prsA]]''
 
* ''[[prsA]]''
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* ''[[resB]]''
 
* ''[[resB]]''
 
* ''[[resC]]''
 
* ''[[resC]]''
−
* ''[[rnc]]''
+
 
−
* ''[[rnjA]]''
 
−
* ''[[rnpA]]''
 
−
* ''[[rny]]''
 
−
* ''[[rnz]]''
 
 
* ''[[rodA]]''
 
* ''[[rodA]]''
−
* ''[[rplB]]''
+
 
−
* ''[[rplC]]''
+
 
−
* ''[[rplD]]''
 
−
* ''[[rplE]]''
 
−
* ''[[rplF]]''
 
−
* ''[[rplJ]]''
 
−
* ''[[rplL]]''
 
−
* ''[[rplM]]''
 
−
* ''[[rplN]]''
 
−
* ''[[rplP]]''
 
−
* ''[[rplQ]]''
 
−
* ''[[rplR]]''
 
−
* ''[[rplS]]''
 
−
* ''[[rplT]]''
 
−
* ''[[rplU]]''
 
−
* ''[[rplX]]''
 
−
* ''[[rpmA]]''
 
−
* ''[[rpmD]]''
 
−
* ''[[rpoA]]''
 
−
* ''[[rpoB]]''
 
−
* ''[[rpoC]]''
 
−
* ''[[rpsB]]''
 
−
* ''[[rpsC]]''
 
−
* ''[[rpsD]]''
 
−
* ''[[rpsE]]''
 
−
* ''[[rpsG]]''
 
−
* ''[[rpsH]]''
 
−
* ''[[rpsI]]''
 
−
* ''[[rpsJ]]''
 
−
* ''[[rpsK]]''
 
−
* ''[[rpsL]]''
 
−
* ''[[rpsM]]''
 
−
* ''[[rpsN]]''
 
−
* ''[[rpsO]]''
 
−
* ''[[rpsP]]''
 
−
* ''[[rpsQ]]''
 
−
* ''[[rpsR]]''
 
−
* ''[[rpsS]]''
 
 
* ''[[scpA]]''
 
* ''[[scpA]]''
 
* ''[[scr]]''
 
* ''[[scr]]''
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* ''[[secE]]''
 
* ''[[secE]]''
 
* ''[[secY]]''
 
* ''[[secY]]''
−
* ''[[serS]]''
+
 
−
* ''[[sigA]]''
 
 
* ''[[sknR]]''
 
* ''[[sknR]]''
 
* ''[[smc]]''
 
* ''[[smc]]''
 
* ''[[spoVC]]''
 
* ''[[spoVC]]''
−
* ''[[ssbA]]''
+
 
 
* ''[[sufB]]''
 
* ''[[sufB]]''
 
* ''[[sufC]]''
 
* ''[[sufC]]''
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* ''[[tagH]]''
 
* ''[[tagH]]''
 
* ''[[tagO]]''
 
* ''[[tagO]]''
−
* ''[[tilS]]''
+
 
 
* ''[[tmk]]''
 
* ''[[tmk]]''
 
* ''[[trmD]]''
 
* ''[[trmD]]''
 
* ''[[trmU]]''
 
* ''[[trmU]]''
−
* ''[[trpS]]''
+
 
 
* ''[[trxA]]''
 
* ''[[trxA]]''
 
* ''[[trxB]]''
 
* ''[[trxB]]''
−
* ''[[tsf]]''
+
 
−
* ''[[tufA]]''
 
−
* ''[[tyrS]]''
 
 
* ''[[uppS]]''
 
* ''[[uppS]]''
−
* ''[[valS]]''
+
 
 
* ''[[walK]]''
 
* ''[[walK]]''
 
* ''[[walR]]''
 
* ''[[walR]]''

Revision as of 20:46, 27 September 2012

Parent category
Neighbouring categories
Related categories

none

Genes in this functional category

Aminoacyl-tRNA synthetases


Ribosomal proteins

Translation/ other

DNA replication


Transcription

RNases

Other


Important original publications

Helena B Thomaides, Ella J Davison, Lisa Burston, Hazel Johnson, David R Brown, Alison C Hunt, Jeffery Errington, Lloyd Czaplewski
Essential bacterial functions encoded by gene pairs.
J Bacteriol: 2007, 189(2);591-602
[PubMed:17114254] [WorldCat.org] [DOI] (P p)

Alison Hunt, Joy P Rawlins, Helena B Thomaides, Jeff Errington
Functional analysis of 11 putative essential genes in Bacillus subtilis.
Microbiology (Reading): 2006, 152(Pt 10);2895-2907
[PubMed:17005971] [WorldCat.org] [DOI] (P p)

K Kobayashi, S D Ehrlich, A Albertini, G Amati, K K Andersen, M Arnaud, K Asai, S Ashikaga, S Aymerich, P Bessieres, F Boland, S C Brignell, S Bron, K Bunai, J Chapuis, L C Christiansen, A Danchin, M Débarbouille, E Dervyn, E Deuerling, K Devine, S K Devine, O Dreesen, J Errington, S Fillinger, S J Foster, Y Fujita, A Galizzi, R Gardan, C Eschevins, T Fukushima, K Haga, C R Harwood, M Hecker, D Hosoya, M F Hullo, H Kakeshita, D Karamata, Y Kasahara, F Kawamura, K Koga, P Koski, R Kuwana, D Imamura, M Ishimaru, S Ishikawa, I Ishio, D Le Coq, A Masson, C Mauël, R Meima, R P Mellado, A Moir, S Moriya, E Nagakawa, H Nanamiya, S Nakai, P Nygaard, M Ogura, T Ohanan, M O'Reilly, M O'Rourke, Z Pragai, H M Pooley, G Rapoport, J P Rawlins, L A Rivas, C Rivolta, A Sadaie, Y Sadaie, M Sarvas, T Sato, H H Saxild, E Scanlan, W Schumann, J F M L Seegers, J Sekiguchi, A Sekowska, S J Séror, M Simon, P Stragier, R Studer, H Takamatsu, T Tanaka, M Takeuchi, H B Thomaides, V Vagner, J M van Dijl, K Watabe, A Wipat, H Yamamoto, M Yamamoto, Y Yamamoto, K Yamane, K Yata, K Yoshida, H Yoshikawa, U Zuber, N Ogasawara
Essential Bacillus subtilis genes.
Proc Natl Acad Sci U S A: 2003, 100(8);4678-83
[PubMed:12682299] [WorldCat.org] [DOI] (P p)

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