Difference between revisions of "DtpT"
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|style="background:#ABCDEF;" align="center"|'''Gene name''' | |style="background:#ABCDEF;" align="center"|'''Gene name''' | ||
| − | |'' | + | |''dtpT'' |
|- | |- | ||
| − | |style="background:#ABCDEF;" align="center"| '''Synonyms''' || '' | + | |style="background:#ABCDEF;" align="center"| '''Synonyms''' || ''yclF '' |
|- | |- | ||
|style="background:#ABCDEF;" align="center"| '''Essential''' || no | |style="background:#ABCDEF;" align="center"| '''Essential''' || no | ||
| Line 14: | Line 14: | ||
|style="background:#ABCDEF;" align="center"|'''Function''' || uptake of di- and tripeptides | |style="background:#ABCDEF;" align="center"|'''Function''' || uptake of di- and tripeptides | ||
|- | |- | ||
| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU03670 | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU03670 dtpT] |
|- | |- | ||
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 53 kDa, 9.92 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 53 kDa, 9.92 | ||
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* '''Operon:''' | * '''Operon:''' | ||
| − | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=dtpT_416235_417713_-1 | + | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=dtpT_416235_417713_-1 dtpT] {{PubMed|22383849}} |
* '''Sigma factor:''' | * '''Sigma factor:''' | ||
| Line 143: | Line 143: | ||
=References= | =References= | ||
| − | <pubmed>11717292, 8458848 23798427 </pubmed> | + | <pubmed>11717292, 8458848 23798427 25966844</pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 13:03, 15 May 2015
- Description: proton-dependent di- and tripeptide transporter
| Gene name | dtpT |
| Synonyms | yclF |
| Essential | no |
| Product | peptide transporter |
| Function | uptake of di- and tripeptides |
| Gene expression levels in SubtiExpress: dtpT | |
| MW, pI | 53 kDa, 9.92 |
| Gene length, protein length | 1476 bp, 492 aa |
| Immediate neighbours | yclE, yclG |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
transporters/ other, utilization of nitrogen sources other than amino acids, membrane proteins, sporulation proteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU03670
Phenotypes of a mutant
Database entries
- BsubCyc: BSU03670
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: POT family of secondary (PMF-dependent) transporters
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization:
- cell membrane (according to Swiss-Prot)
Database entries
- BsubCyc: BSU03670
- UniProt: P94408
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Sigma factor:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Boris R Belitsky, Giulia Barbieri, Alessandra M Albertini, Eugenio Ferrari, Mark A Strauch, Abraham L Sonenshein
Interactive regulation by the Bacillus subtilis global regulators CodY and ScoC.
Mol Microbiol: 2015, 97(4);698-716
[PubMed:25966844]
[WorldCat.org]
[DOI]
(I p)
Shintaro Doki, Hideaki E Kato, Nicolae Solcan, Masayo Iwaki, Michio Koyama, Motoyuki Hattori, Norihiko Iwase, Tomoya Tsukazaki, Yuji Sugita, Hideki Kandori, Simon Newstead, Ryuichiro Ishitani, Osamu Nureki
Structural basis for dynamic mechanism of proton-coupled symport by the peptide transporter POT.
Proc Natl Acad Sci U S A: 2013, 110(28);11343-8
[PubMed:23798427]
[WorldCat.org]
[DOI]
(I p)
R Caldwell, R Sapolsky, W Weyler, R R Maile, S C Causey, E Ferrari
Correlation between Bacillus subtilis scoC phenotype and gene expression determined using microarrays for transcriptome analysis.
J Bacteriol: 2001, 183(24);7329-40
[PubMed:11717292]
[WorldCat.org]
[DOI]
(P p)
E R Kunji, E J Smid, R Plapp, B Poolman, W N Konings
Di-tripeptides and oligopeptides are taken up via distinct transport mechanisms in Lactococcus lactis.
J Bacteriol: 1993, 175(7);2052-9
[PubMed:8458848]
[WorldCat.org]
[DOI]
(P p)
