Difference between revisions of "DtpT"

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|style="background:#ABCDEF;" align="center"| '''Product''' || peptide transporter  
 
|style="background:#ABCDEF;" align="center"| '''Product''' || peptide transporter  
 
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|style="background:#ABCDEF;" align="center"|'''Function''' || uptake of peptides
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|style="background:#ABCDEF;" align="center"|'''Function''' || uptake of di- and tripeptides
 
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU03670 yclF]
 
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU03670 yclF]

Revision as of 09:33, 14 November 2012

  • Description: peptide transporter

Gene name yclF
Synonyms dtpT
Essential no
Product peptide transporter
Function uptake of di- and tripeptides
Gene expression levels in SubtiExpress: yclF
MW, pI 53 kDa, 9.92
Gene length, protein length 1476 bp, 492 aa
Immediate neighbours yclE, yclG
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YclF context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YclF expression.png















Categories containing this gene/protein

transporters/ other, utilization of nitrogen sources other than amino acids, membrane proteins

This gene is a member of the following regulons

ScoC regulon

The gene

Basic information

  • Locus tag: BSU03670

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: POT family of secondary (PMF-dependent) transporters
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
    • repressed during exponential growth (ScoC) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

R Caldwell, R Sapolsky, W Weyler, R R Maile, S C Causey, E Ferrari
Correlation between Bacillus subtilis scoC phenotype and gene expression determined using microarrays for transcriptome analysis.
J Bacteriol: 2001, 183(24);7329-40
[PubMed:11717292] [WorldCat.org] [DOI] (P p)

E R Kunji, E J Smid, R Plapp, B Poolman, W N Konings
Di-tripeptides and oligopeptides are taken up via distinct transport mechanisms in Lactococcus lactis.
J Bacteriol: 1993, 175(7);2052-9
[PubMed:8458848] [WorldCat.org] [DOI] (P p)