Difference between revisions of "DegU"

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(The protein)
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Revision as of 20:22, 12 February 2009

  • Description: two-component response regulator that controls degradative enzyme synthesis and genetic competence

Gene name degU
Synonyms sacU, iep
Essential
Product two-component response regulator
Function control of degradative enzyme synthesis and

of genetic competence

MW, pI 25 kDa, 5.602
Gene length, protein length 687 bp, 229 aa
Immediate neighbours
Gene sequence (+200bp) Protein sequence
Genetic context
DegU context.gif



The gene

Basic information

  • Coordinates:

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: transcription activator of degradative enzyme genes (sacB and degQ) and of comK expression
  • Protein family:
  • Paralogous protein(s):

Genes controlled by DegU

  • Repression by DegU:

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification: phosphorylation by DegS modulates DNA-binding activity
  • Cofactor(s):
  • Effectors of protein activity:
  • Localization:

Database entries

  • Structure:
  • Swiss prot entry:
  • KEGG entry:
  • E.C. number:

Additional information

Expression and regulation

  • Regulation: induced in the presence of ammonium (TnrA)
  • Regulatory mechanism: TnrA: repression, DegU: positive autoregulation
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

  1. Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed