Difference between revisions of "DapI"

From SubtiWiki
Jump to: navigation, search
Line 54: Line 54:
 
=== Basic information/ Evolution ===
 
=== Basic information/ Evolution ===
  
* '''Catalyzed reaction/ biological activity:'''  
+
* '''Catalyzed reaction/ biological activity:''' N-acetyl-LL-2,6-diaminoheptanedioate + H<sub>2</sub>O = acetate + LL-2,6-diaminoheptanedioate (according to Swiss-Prot)
  
 
* '''Protein family:''' peptidase M20A family (according to Swiss-Prot)
 
* '''Protein family:''' peptidase M20A family (according to Swiss-Prot)

Revision as of 18:53, 23 May 2009

  • Description: N6-acetyl-LL-2,6-diaminoheptanedioate amidohydrolase

Gene name ykuR
Synonyms
Essential yes PubMed
Product N6-acetyl-LL-2,6-diaminoheptanedioate amidohydrolase
Function biosynthesis of lysine and peptidoglycan
MW, pI 41 kDa, 5.102
Gene length, protein length 1122 bp, 374 aa
Immediate neighbours ykuQ, ykuS
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YkuR context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Coordinates:

Phenotypes of a mutant

essential PubMed

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: N-acetyl-LL-2,6-diaminoheptanedioate + H2O = acetate + LL-2,6-diaminoheptanedioate (according to Swiss-Prot)
  • Protein family: peptidase M20A family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:

Additional information

Expression and regulation

  • Operon:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

  1. Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed